RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ABLIM2Q6H8Q1 611 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 ATG4DQ86TL0 474 aaPredicted RBP14.16□□□□□ -0.14
LMX1B-204ENST00000561065 SLC35B4Q969S0 331 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF607Q96SK3 696 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 SH3GL1Q99961 368 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 BCL2L10Q9HD36 194 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 A4GALTQ9NPC4 353 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 CTPS2Q9NRF8 586 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 PRSS50Q9UI38 385 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 GPR52Q9Y2T5 361 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 HDGFL3Q9Y3E1 203 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 GMEB1Q9Y692 573 aa14.16□□□□□ -0.14
LMX1B-204ENST00000561065 YES1P07947 543 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 BMP2P12643 396 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 SLC6A2P23975 617 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 ADSLP30566 484 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 SLC1A3P43003 542 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 IDH2P48735 452 aaKnown RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 CYLC2Q14093 348 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF311Q5JNZ3 666 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 GCNT6Q5T4J0 391 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 REEP3Q6NUK4 255 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF704Q6ZNC4 412 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 DDIT4LQ96D03 193 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 THOC1Q96FV9 657 aaKnown RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 AURKBQ96GD4 344 aaPredicted RBP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 PLPPR2Q96GM1 343 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 ARL5BQ96KC2 179 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 CCL19Q99731 98 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 PIP5K1AQ99755 562 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 TMEM204Q9BSN7 226 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 OR11A1Q9GZK7 315 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 OR10A4Q9H209 315 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 EVA1AQ9H8M9 152 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 ZNF446Q9NWS9 450 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 KLHL9Q9P2J3 617 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 CHRNA9Q9UGM1 479 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 NIPBLQ6KC79 2804 aaeCLIP14.15□□□□□ -0.14
LMX1B-204ENST00000561065 CADP27708 2225 aa14.15□□□□□ -0.14
LMX1B-204ENST00000561065 PRORSD1PA6NEY8 169 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 SULT2B1O00204 365 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 DNPH1O43598 174 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 NPPAP01160 153 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 CXCR1P25024 350 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 OR3A2P47893 321 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 POLR2HP52434 150 aaKnown RBP14.15□□□□□ -0.15
LMX1B-204ENST00000561065 NKX6-1P78426 367 aaPredicted RBP14.15□□□□□ -0.15
LMX1B-204ENST00000561065 RASGEF1BQ0VAM2 473 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 MMEL1Q495T6 779 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 Q5PR19 223 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 SFRP5Q5T4F7 317 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 MRPL2Q5T653 305 aaKnown RBP14.15□□□□□ -0.15
LMX1B-204ENST00000561065 TMPPEQ6ZT21 453 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 SLC30A8Q8IWU4 369 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 DPP10Q8N608 796 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 ZNF775Q96BV0 537 aaPredicted RBP14.15□□□□□ -0.15
LMX1B-204ENST00000561065 TMEM19Q96HH6 336 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 SMR3AQ99954 134 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.15
LMX1B-204ENST00000561065 SPATA9Q9BWV2 254 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 TMEM120AQ9BXJ8 343 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 HDHD5Q9BXW7 423 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 CCDC134Q9H6E4 229 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 TRAPPC4Q9Y296 219 aa14.15□□□□□ -0.15
LMX1B-204ENST00000561065 NSD1Q96L73 2696 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-204ENST00000561065 DSPPQ9NZW4 1301 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 USF3Q68DE3 2245 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ZANQ9Y493 2812 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 CDHR4A6H8M9 788 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ZNF716A6NP11 495 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ZNF208O43345 1280 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 EIF1BO60739 113 aaKnown RBP14.14□□□□□ -0.15
LMX1B-204ENST00000561065 RAMP1O60894 148 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ADAP00813 363 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 GPX2P18283 190 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 MDH1P40925 334 aaKnown RBP14.14□□□□□ -0.15
LMX1B-204ENST00000561065 CDK6Q00534 326 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 RBBP4Q09028 425 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 TAB1Q15750 504 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 PAGE3Q5JUK9 113 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 RNF220Q5VTB9 566 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 WBP2NLQ6ICG8 309 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 C20orf204Q6ZNR8 217 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ADGRG3Q86Y34 549 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 STEAP2Q8NFT2 490 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 TMEM38AQ9H6F2 299 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 FGFR1OP2Q9NVK5 253 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 EMC3Q9P0I2 261 aa14.14□□□□□ -0.15
LMX1B-204ENST00000561065 ZNF443Q9Y2A4 671 aaPredicted RBP14.14□□□□□ -0.15
LMX1B-204ENST00000561065 NAV3Q8IVL0 2385 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 TMED7-TICAM2A0A0A6YYA0 188 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 SMPD2O60906 423 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 PGM3O95394 542 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 HOXB9P17482 250 aaPredicted RBP14.13□□□□□ -0.15
LMX1B-204ENST00000561065 COX5AP20674 150 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 FPR1P21462 350 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 NTF4P34130 210 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 NFYCQ13952 458 aa14.13□□□□□ -0.15
LMX1B-204ENST00000561065 ALKBH2Q6NS38 261 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms