RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 HNRNPA1L2Q32P51 320 aaKnown RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 WSCD1Q658N2 575 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 SLC8B1Q6J4K2 584 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 IFNEQ86WN2 208 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 SLC35F2Q8IXU6 374 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 OR5L2Q8NGL0 311 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 IL1F10Q8WWZ1 152 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 OR1E3Q8WZA6 343 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 NRGNQ92686 78 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 TMIGD2Q96BF3 282 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 ZNF707Q96C28 371 aaPredicted RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 NTNG2Q96CW9 530 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 DNAJA3Q96EY1 480 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 TIMD4Q96H15 378 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 SERAC1Q96JX3 654 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 C12orf42Q96LP6 360 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 ZNF597Q96LX8 424 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 C1orf147Q96MC9 270 aaPredicted RBP2.9□□□□□ -1.95
SPG11-218ENST00000559754 SPATA16Q9BXB7 569 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 RAB34Q9BZG1 259 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 ELOVL6Q9H5J4 265 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 NIPAL2Q9H841 368 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 ESM1Q9NQ30 184 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 AGPAT3Q9NRZ7 376 aa2.9□□□□□ -1.95
SPG11-218ENST00000559754 IGLV4-3A0A075B6K6 122 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 IGHV2-70DA0A0C4DH43 119 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 TUBAL3A6NHL2 446 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 SHISA9B4DS77 424 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 C11orf98E9PRG8 122 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 K7ERQ8 282 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 DLGAP1O14490 977 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 PHOX2AO14813 284 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 POLR1CO15160 346 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 CETN3O15182 167 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 CLOCKO15516 846 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GALR3O60755 368 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 UGT2B17O75795 530 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 TMEM50AO95807 157 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 NUDT14O95848 222 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GAPDHP04406 335 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 STAG3L2P0CL84 134 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ZNF24P17028 368 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 KITLGP21583 273 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 TUBG1P23258 451 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GCAP28676 217 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 PRDX3P30048 256 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 PPP2R1BP30154 601 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 CDH5P33151 784 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 RDXP35241 583 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 ETV5P41161 510 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GNPDA1P46926 289 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 PEX3P56589 373 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 PLOD1Q02809 727 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 LAGE3Q14657 143 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ZNF77Q15935 545 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 NDUFA9Q16795 377 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ECSCRQ19T08 205 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 FAM83EQ2M2I3 478 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 VPS26BQ4G0F5 336 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 TMEM52BQ4KMG9 183 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 OR8G2PQ6IF36 304 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ENPP6Q6UWR7 440 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 RNF130Q86XS8 419 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ERI1Q8IV48 349 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GPD1LQ8N335 351 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 BPIFB2Q8N4F0 458 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 SUMF1Q8NBK3 374 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 SDR9C7Q8NEX9 313 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 OR1B1Q8NGR6 318 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 MARCH1Q8TCQ1 289 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 SPPL2AQ8TCT8 520 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 DTX3LQ8TDB6 740 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 C11orf52Q96A22 123 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 KIAA1143Q96AT1 154 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 MSANTD3Q96H12 275 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 PPP1R16AQ96I34 528 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 ZBED3Q96IU2 234 aaPredicted RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 FMO2Q99518 471 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 P2RY13Q9BPV8 354 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 NMRAL1Q9HBL8 299 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 POPDC2Q9HBU9 364 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 LYRM4Q9HD34 91 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 TUBG2Q9NRH3 451 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 NUDT15Q9NV35 164 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 LYARQ9NX58 379 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 BFARQ9NZS9 450 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 THYN1Q9P016 225 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 GMEB1Q9Y692 573 aa2.89□□□□□ -1.95
SPG11-218ENST00000559754 BZW2Q9Y6E2 419 aaKnown RBP2.89□□□□□ -1.95
SPG11-218ENST00000559754 IGHV3-20A0A0C4DH32 117 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 TRBV5-4A0A0C4DH59 114 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 A0A1W2PPV9 198 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 PSMD11O00231 422 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 LATO43561 262 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 FRAT2O75474 233 aaPredicted RBP2.88□□□□□ -1.95
SPG11-218ENST00000559754 ATP5LO75964 103 aa2.88□□□□□ -1.95
SPG11-218ENST00000559754 NXPH4O95158 308 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms