RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ARMC7Q9H6L4 198 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 CHST11Q9NPF2 352 aa16.69■□□□□ 0.26
CASC4-209ENST00000559222 PAQR5Q9NXK6 330 aaPredicted RBP16.69■□□□□ 0.26
CASC4-209ENST00000559222 SULT2B1O00204 365 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 EDNRAP25101 427 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 AGTR1P30556 359 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 UQCRC1P31930 480 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 COPZ1P61923 177 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 FBXL19-AS1Q494R0 122 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 ZNF474Q6S9Z5 364 aaPredicted RBP16.68■□□□□ 0.26
CASC4-209ENST00000559222 NUFIP2Q7Z417 695 aaKnown RBP16.68■□□□□ 0.26
CASC4-209ENST00000559222 P3H2Q8IVL5 708 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 ANKS4BQ8N8V4 417 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
CASC4-209ENST00000559222 GALNT8Q9NY28 637 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 ABCD2Q9UBJ2 740 aa16.68■□□□□ 0.26
CASC4-209ENST00000559222 SPIN1Q9Y657 262 aaPredicted RBP16.68■□□□□ 0.26
CASC4-209ENST00000559222 PKDREJQ9NTG1 2253 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 FREM1Q5H8C1 2179 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 IGKV1D-42A0A075B6H8 117 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ELOVL7A1L3X0 281 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ZNF208O43345 1280 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 DCTN3O75935 186 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 THY1P04216 161 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 CRHP06850 196 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 COX6B1P14854 86 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 CXCR1P25024 350 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 OR2B6P58173 313 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 EGR4Q05215 589 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 VEZF1Q14119 521 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 LRRC23Q53EV4 343 aaPredicted RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 INTS11Q5TA45 600 aaKnown RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 FAM91A1Q658Y4 838 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ABLIM2Q6H8Q1 611 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ERICH5Q6P6B1 374 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 FAM214BQ7L5A3 538 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 ARPINQ7Z6K5 226 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 CCDC103Q8IW40 242 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 TUSC5Q8IXB3 177 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ZNF295-AS1Q8N0V1 137 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 ZNF610Q8N9Z0 462 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 RNASE6Q93091 150 aaKnown RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 ZNF775Q96BV0 537 aaPredicted RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 GMPPAQ96IJ6 420 aaPredicted RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 HOPXQ9BPY8 73 aaPredicted RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 PSD2Q9BQI7 771 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 RBM24Q9BX46 236 aaKnown RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 C12orf49Q9H741 205 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 TIGARQ9NQ88 270 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 KLHL13Q9P2N7 655 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 TESQ9UGI8 421 aaKnown RBP16.67■□□□□ 0.26
CASC4-209ENST00000559222 TAGLN3Q9UI15 199 aa16.67■□□□□ 0.26
CASC4-209ENST00000559222 A8MXE2 369 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 SYT5O00445 386 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 LYPD3O95274 346 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 PMS2P2O95744 297 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 PLGP00747 810 aaPredicted RBP16.66■□□□□ 0.26
CASC4-209ENST00000559222 NCK1P16333 377 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 CPOXP36551 454 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 SLC25A3Q00325 362 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 OR1Q1Q15612 314 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 GKAP1Q5VSY0 366 aaPredicted RBP16.66■□□□□ 0.26
CASC4-209ENST00000559222 DMRTC2Q8IXT2 367 aaPredicted RBP16.66■□□□□ 0.26
CASC4-209ENST00000559222 RNF148Q8N7C7 305 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 LSMEM1Q8N8F7 131 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 DDIT4LQ96D03 193 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 MCHR1Q99705 422 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 ZNF559Q9BR84 538 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 PTDSS2Q9BVG9 487 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 CELSR2Q9HCU4 2923 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 TMEM181Q9P2C4 612 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 SLC13A4Q9UKG4 626 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 HDGFL3Q9Y3E1 203 aa16.66■□□□□ 0.26
CASC4-209ENST00000559222 FBN2P35556 2912 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 A0A0B4J2E0 115 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 A0A1B0GX12 115 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 CPSF4LA6NMK7 179 aaKnown RBP16.65■□□□□ 0.26
CASC4-209ENST00000559222 CYTIPO60759 359 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 NPIPB7O75200 414 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 FPR1P21462 350 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 CCKARP32238 428 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 KDELR2P33947 212 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 CTBP2P56545 445 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 CEACAM7Q14002 265 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 CYBRD1Q53TN4 286 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 WDR88Q6ZMY6 472 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 MCEMP1Q8IX19 187 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 FAM156AQ8NDB6 213 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 KTI12Q96EK9 354 aaPredicted RBP16.65■□□□□ 0.26
CASC4-209ENST00000559222 SPOCK3Q9BQ16 436 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 PIGMQ9H3S5 423 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 ALG2Q9H553 416 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 KLHL28Q9NXS3 571 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 RPS6KB2Q9UBS0 482 aa16.65■□□□□ 0.26
CASC4-209ENST00000559222 SEC14L4Q9UDX3 406 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms