RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 NSL1Q96IY1 281 aa16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 C12orf10Q9HB07 376 aa16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 TMEM27Q9HBJ8 222 aa16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 CHST11Q9NPF2 352 aa16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 SELENONQ9NZV5 590 aa16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 GMPR2Q9P2T1 348 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-208ENST00000558954 A0A1B0GWA3 101 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 A0A1W2PNV4 684 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 NKX2-6A6NCS4 301 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 DNPH1O43598 174 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 PNMTP11086 282 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 CALB2P22676 271 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 SLC25A3Q00325 362 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 FOXF2Q12947 444 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 RNPS1Q15287 305 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 CYBRD1Q53TN4 286 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 ALG10BQ5I7T1 473 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 SAMD4BQ5PRF9 694 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 SWT1Q5T5J6 900 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 GTF2IRD2BQ6EKJ0 949 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 ULK3Q6PHR2 472 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 FCRLAQ7L513 359 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 GTF2IRD2Q86UP8 949 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 MCEMP1Q8IX19 187 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 OR6T1Q8NGN1 323 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 VANGL1Q8TAA9 524 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 GMPPAQ96IJ6 420 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 ARL5BQ96KC2 179 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 MCHR1Q99705 422 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 UCK2Q9BZX2 261 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 GLRX2Q9NS18 164 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 ADPRHL2Q9NX46 363 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 SH3GLB1Q9Y371 365 aa16.89■□□□□ 0.29
RABGGTA-208ENST00000558954 FLNBO75369 2602 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 A8MVM7 634 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 TMEM229AB2RXF0 380 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 EEF1E1-BLOC1S5C9J1V9 151 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 EEF1E1O43324 174 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 ENPP1P22413 925 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 ASCL1P50553 236 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 SPATS1Q496A3 300 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 ZNF613Q6PF04 617 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 DEFB107AQ8IZN7 70 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 SLC43A2Q8N370 569 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 CNEP1R1Q8N9A8 125 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 ROBO4Q8WZ75 1007 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 LRRC46Q96FV0 321 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 TPD52L3Q96J77 140 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 WFDC6Q9BQY6 131 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 PIGMQ9H3S5 423 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 PACSIN3Q9UKS6 424 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 TRAPPC4Q9Y296 219 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 EMC9Q9Y3B6 208 aa16.88■□□□□ 0.29
RABGGTA-208ENST00000558954 A0A0B4J2E0 115 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 A0A1B0GX12 115 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 ZC3H12DA2A288 527 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 B2RBV5 119 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 SMAD9O15198 467 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 GMNNO75496 209 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 TNFSF13O75888 250 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 HSD17B1P14061 328 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 GGT1P19440 569 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 IDUAP35475 653 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 AGFG1P52594 562 aaKnown RBP16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 CTBP2P56545 445 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 BNIP2Q12982 314 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 GUSBP1Q15486 140 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 OR1Q1Q15612 314 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 NPTX1Q15818 432 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 C5orf46Q6UWT4 87 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 CARM1Q86X55 608 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 RNF148Q8N7C7 305 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 ABHD3Q8WU67 409 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 FAM162AQ96A26 154 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 SLC47A1Q96FL8 570 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 POTEKPQ9BYX7 375 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 PCDHAC1Q9H158 963 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 GP6Q9HCN6 339 aa16.87■□□□□ 0.29
RABGGTA-208ENST00000558954 ADGRG4Q8IZF6 3080 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 ANKHD1Q8IWZ3 2542 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 TPST2O60704 377 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 SS18L1O75177 396 aaPredicted RBP16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 GPIP06744 558 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 OR2B6P58173 313 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 SELENOWP63302 87 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 SIRPAP78324 504 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 SLC35A1P78382 337 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 TFF3Q07654 80 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 ENTPD8Q5MY95 495 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 C1orf140Q5VVS0 124 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 FAM214BQ7L5A3 538 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 RBM15BQ8NDT2 890 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 RNF217Q8TC41 542 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 STK35Q8TDR2 534 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 SLC38A4Q969I6 547 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 DNAJA3Q96EY1 480 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 CDRT15Q96T59 188 aa16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 TACO1Q9BSH4 297 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-208ENST00000558954 PRR14Q9BWN1 585 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms