RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 UBE2E3Q969T4 207 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 FAF2Q96CS3 445 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CELF6Q96J87 481 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 SERAC1Q96JX3 654 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 IL4I1Q96RQ9 567 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CLCC1Q96S66 551 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CCT8L2Q96SF2 557 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CYP2S1Q96SQ9 504 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 ATF6BQ99941 703 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 BPIFA3Q9BQP9 254 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CENPKQ9BS16 269 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 SLC35A5Q9BS91 424 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 CHCHD5Q9BSY4 110 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 MRPL37Q9BZE1 423 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 SLITRK2Q9H156 845 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 PPDPFQ9H3Y8 114 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 TMEM185BQ9H7F4 350 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 JPT2Q9H910 190 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 NMRAL1Q9HBL8 299 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 ZNF160Q9HCG1 818 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 AMBNQ9NP70 447 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 TIGARQ9NQ88 270 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 PNO1Q9NRX1 252 aaKnown RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 GCNT4Q9P109 453 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 WRAP73Q9P2S5 460 aaPredicted RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 PSMC3IPQ9P2W1 217 aaPredicted RBP2.53□□□□□ -2
TRAV28-201ENST00000557548 IKZF2Q9UKS7 526 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 PROCRQ9UNN8 238 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 RIMBP3CA6NJZ7 1639 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 RIMBP3BA6NNM3 1639 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 RIMBP3Q9UFD9 1639 aa2.53□□□□□ -2
TRAV28-201ENST00000557548 KIF13AQ9H1H9 1805 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF840PA6NDX5 716 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 VGLL3A8MV65 326 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ZNF487B1APH4 448 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 TRDCB7Z8K6 153 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 C9JVG2 144 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PRR23D1E9PI22 279 aaPredicted RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 SOCS3O14543 225 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CXCL13O43927 109 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PRKYO43930 277 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 OR10H3O60404 316 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PFKFB2O60825 505 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 UGT2B17O75795 530 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 LGI1O95970 557 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CSTAP01040 98 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 KRT6AP02538 564 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 FTH1P02794 183 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PRR23D2P0DMB1 279 aaPredicted RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 MCF2P10911 925 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ANXA13P27216 316 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 LEPP41159 167 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ETV5P41161 510 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CDKN1BP46527 198 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ALDH3B2P48448 385 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 DAP3P51398 398 aaKnown RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PRKXP51817 358 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PLTPP55058 493 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CD300CQ08708 224 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 SLC15A2Q16348 729 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 KLHL40Q2TBA0 621 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 TMEM30BQ3MIR4 351 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 C8orf74Q6P047 294 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 EIF3MQ7L2H7 374 aaKnown RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 GTPBP8Q8N3Z3 284 aaPredicted RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CEP112Q8N8E3 955 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CLHC1Q8NHS4 586 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ARNTL2Q8WYA1 636 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CDKL2Q92772 493 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ISG20Q96AZ6 181 aaKnown RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 TMIGD2Q96BF3 282 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 SLC45A3Q96JT2 553 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 TSNARE1Q96NA8 513 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PANX2Q96RD6 677 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 RNF2Q99496 336 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 FGFBP2Q9BYJ0 223 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ANKRD19PQ9H560 264 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 GEMIN7Q9H840 131 aaKnown RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 NT5MQ9NPB1 228 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 SCRT2Q9NQ03 307 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 BFARQ9NZS9 450 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CHMP5Q9NZZ3 219 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CD300AQ9UGN4 299 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 L3MBTL1Q9Y468 752 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 PEX16Q9Y5Y5 336 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 WDR97A6NE52 1622 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 CFAP65Q6ZU64 1925 aaKnown RBP2.52□□□□□ -2.01
TRAV28-201ENST00000557548 WDR62O43379 1518 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 ATP10AO60312 1499 aa2.52□□□□□ -2.01
TRAV28-201ENST00000557548 KIF27Q86VH2 1401 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SBNO1A3KN83 1393 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 A0A1B0GUS0 222 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 A0A1W2PPV9 198 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 FRG2CA6NGY1 282 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 CCT8L1PA6NM43 557 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 SUPT3HB4E1H0 165 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 E9PLD3 99 aa2.51□□□□□ -2.01
TRAV28-201ENST00000557548 G3V3Y1 287 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms