RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 STARD4Q96DR4 205 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 ECSITQ9BQ95 431 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 SRXN1Q9BYN0 137 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-207ENST00000556831 COQ10BQ9H8M1 238 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 MCCC2Q9HCC0 563 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 GP6Q9HCN6 339 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 ELOVL5Q9NYP7 299 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 EMC3Q9P0I2 261 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 TMED7Q9Y3B3 224 aa12.6□□□□□ -0.39
SLIRP-207ENST00000556831 HRNRQ86YZ3 2850 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-207ENST00000556831 HEATR5AQ86XA9 2040 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 AKAP9Q99996 3911 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF208O43345 1280 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 DNPH1O43598 174 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 EFNA2O43921 213 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 FESP07332 822 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 AGTR1P30556 359 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 CD79BP40259 229 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 OR2B6P58173 313 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 RASGEF1BQ0VAM2 473 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 TMPPEQ6ZT21 453 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 RETREG3Q86VR2 466 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 C10orf82Q8WW14 230 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF317Q96PQ6 595 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-207ENST00000556831 IKZF5Q9H5V7 419 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 C12orf49Q9H741 205 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 EVA1AQ9H8M9 152 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 CRIM1Q9NZV1 1036 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
SLIRP-207ENST00000556831 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 KRT34O76011 436 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 PMS2P2O95744 297 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 GTF2E2P29084 291 aaKnown RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 IDUAP35475 653 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 RGS8P57771 180 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 DHRS4L2Q6PKH6 230 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 BEND4Q6ZU67 534 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 PATL1Q86TB9 770 aaKnown RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 RANBP3LQ86VV4 465 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 OR8J3Q8NGG0 315 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 OR10A6Q8NH74 314 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 LRRC58Q96CX6 371 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 ELAC2Q9BQ52 826 aaKnown RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-207ENST00000556831 MED18Q9BUE0 208 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 TAPBPLQ9BX59 468 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 ARMCX1Q9P291 453 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 TMEM181Q9P2C4 612 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 OSGIN1Q9UJX0 560 aa12.58□□□□□ -0.4
SLIRP-207ENST00000556831 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 SH3D21A4FU49 640 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ELOA3DA6NLF2 546 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-207ENST00000556831 C16orf97H3BN30 126 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
SLIRP-207ENST00000556831 GPIP06744 558 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 YES1P07947 543 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 EPXP11678 715 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 PCGF2P35227 344 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 SLC35A1P78382 337 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 PLAURQ03405 335 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 GUSBP1Q15486 140 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ELOA3BQ3SY89 546 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ARPINQ7Z6K5 226 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ADGRG3Q86Y34 549 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 TUSC5Q8IXB3 177 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ELOA3Q8NG57 546 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 OR52E4Q8NGH9 312 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 RP9Q8TA86 221 aaKnown RBP12.57□□□□□ -0.4
SLIRP-207ENST00000556831 RASSF5Q8WWW0 418 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 DNAJA3Q96EY1 480 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 LURAP1Q96LR2 239 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 CCT8L2Q96SF2 557 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 TRIM2Q9C040 744 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 KLHL4Q9C0H6 718 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 OR11A1Q9GZK7 315 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 KAT8Q9H7Z6 458 aaKnown RBP12.57□□□□□ -0.4
SLIRP-207ENST00000556831 NANOGQ9H9S0 305 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 ZNF226Q9NYT6 803 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 TESQ9UGI8 421 aaKnown RBP12.57□□□□□ -0.4
SLIRP-207ENST00000556831 EDARQ9UNE0 448 aa12.57□□□□□ -0.4
SLIRP-207ENST00000556831 A8MVM7 634 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 FBP2O00757 339 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 GPR171O14626 319 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
SLIRP-207ENST00000556831 FRS3O43559 492 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 CYTIPO60759 359 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 ADAM11O75078 769 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 GOSR1O95249 250 aa12.56□□□□□ -0.4
SLIRP-207ENST00000556831 AHSA1O95433 338 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms