RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 NANOGP8Q6NSW7 305 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 DHRS4L2Q6PKH6 230 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 TFAP2EQ6VUC0 442 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 NET1Q7Z628 596 aaPredicted RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 MTDHQ86UE4 582 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 SNX32Q86XE0 403 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 C3orf49Q96BT1 292 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 DACH2Q96NX9 599 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 POLDIP3Q9BY77 421 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 KLHL4Q9C0H6 718 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 CLEC4MQ9H2X3 399 aaPredicted RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 PIF1Q9H611 641 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.46
SNX6-203ENST00000555416 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 BCO1Q9HAY6 547 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 ELOVL5Q9NYP7 299 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 HDGFL3Q9Y3E1 203 aa12.15□□□□□ -0.46
SNX6-203ENST00000555416 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 ZNF208O43345 1280 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 TPST2O60704 377 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 MFN2O95140 757 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 HRGP04196 525 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 THBDP07204 575 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 SLC6A2P23975 617 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 PRKAR1BP31321 381 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 HTR3AP46098 478 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 PCYT1AP49585 367 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 SEC24CP53992 1094 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 OR2B6P58173 313 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 TRMT5Q32P41 509 aaKnown RBP12.14□□□□□ -0.47
SNX6-203ENST00000555416 TMEM201Q5SNT2 666 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 REP15Q6BDI9 236 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 GTF2IRD2BQ6EKJ0 949 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 WBP2NLQ6ICG8 309 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 ATG4DQ86TL0 474 aaPredicted RBP12.14□□□□□ -0.47
SNX6-203ENST00000555416 CDH24Q86UP0 819 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 GTF2IRD2Q86UP8 949 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 CDC20BQ86Y33 519 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 LURAP1LQ8IV03 231 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 SLC43A2Q8N370 569 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 POU5F2Q8N7G0 328 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 HIPK4Q8NE63 616 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 OR10A6Q8NH74 314 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 ZC3HAV1LQ96H79 300 aaKnown RBP12.14□□□□□ -0.47
SNX6-203ENST00000555416 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
SNX6-203ENST00000555416 PRSS50Q9UI38 385 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 CORO2BQ9UQ03 480 aa12.14□□□□□ -0.47
SNX6-203ENST00000555416 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
SNX6-203ENST00000555416 DEFB108AA8MXU0 73 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 TMEM229AB2RXF0 380 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 MRASO14807 208 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 OPN1SWP03999 348 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 FPR1P21462 350 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
SNX6-203ENST00000555416 CRYBA2P53672 197 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
SNX6-203ENST00000555416 H3F3AP84243 136 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 CYP51A1Q16850 503 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
SNX6-203ENST00000555416 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 C11orf65Q8NCR3 313 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 LRRC58Q96CX6 371 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 KLHL9Q9P2J3 617 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 GMPR2Q9P2T1 348 aaKnown RBP12.13□□□□□ -0.47
SNX6-203ENST00000555416 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 TRAPPC4Q9Y296 219 aa12.13□□□□□ -0.47
SNX6-203ENST00000555416 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 A0A1B0GWA3 101 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 ZNF724A8MTY0 619 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 M0QX08 132 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 NPIPB7O75200 414 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 UQCRBP14927 111 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CXCR1P25024 350 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
SNX6-203ENST00000555416 DNAJA1P31689 397 aaKnown RBP12.12□□□□□ -0.47
SNX6-203ENST00000555416 EGR4Q05215 589 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CEACAM7Q14002 265 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 DUSP7Q16829 419 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 ZSWIM7Q19AV6 140 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CALHM3Q86XJ0 350 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 KRT73Q86Y46 540 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 TREML1Q86YW5 311 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 ARMC8Q8IUR7 673 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 TMEM99Q8N816 258 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 OR4D11Q8NGI4 311 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 TAMM41Q96BW9 452 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 DDIT4LQ96D03 193 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
SNX6-203ENST00000555416 MED18Q9BUE0 208 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 POTEKPQ9BYX7 375 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms