RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PPA2Q9H2U2 334 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 SMYD3Q9H7B4 428 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 UGT1A10Q9HAW8 530 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 ESM1Q9NQ30 184 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 RPS10P5Q9NQ39 176 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 PNO1Q9NRX1 252 aaKnown RBP4.3□□□□□ -1.72
VRK1-203ENST00000555067 GALPQ9UBC7 116 aa4.3□□□□□ -1.72
VRK1-203ENST00000555067 MROH7-TTC4A0A0A0MT08 1334 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 A0A1B0GUS0 222 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 IQCF5A8MTL0 148 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 A8MXQ7 604 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 NPIPB9F8W1W9 429 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 H3BMQ9 156 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 INPP4BO15327 924 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 TNFSF12O43508 249 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 AP2A1O95782 977 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 SERPINE2P07093 398 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 TRIM49P0CI25 452 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 TRIM49CP0CI26 452 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 ZNF43P17038 809 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 YWHABP31946 246 aaKnown RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 RORAP35398 523 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 HSPA2P54652 639 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 GUCY2DQ02846 1103 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 RIPPLY1Q0D2K3 151 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 RAB40BQ12829 278 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 GCKRQ14397 625 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 LAGE3Q14657 143 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 FASTKD3Q14CZ7 662 aaKnown RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 TEAD2Q15562 447 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 ISXQ2M1V0 245 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 TIGITQ495A1 244 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 LY6G6FQ5SQ64 297 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 TTC23LQ6PF05 361 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 MOB2Q70IA6 237 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 LACC1Q8IV20 430 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 MMAAQ8IVH4 418 aaKnown RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 CATSPER1Q8NEC5 780 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 PROKR2Q8NFJ6 384 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 OR5T2Q8NGG2 359 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 OR5T3Q8NGG3 340 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 OR10G8Q8NGN5 311 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 LRRC20Q8TCA0 184 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 SMAP2Q8WU79 429 aaPredicted RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 PCNPQ8WW12 178 aaKnown RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 CIDECQ96AQ7 238 aaPredicted RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 RAB3CQ96E17 227 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 ZNF486Q96H40 463 aaPredicted RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 PLEKHA8Q96JA3 519 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 ALKBH3Q96Q83 286 aaPredicted RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 MAPKAP1Q9BPZ7 522 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 KCNS3Q9BQ31 491 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 C19orf43Q9BQ61 176 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 BBS2Q9BXC9 721 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 PRRG3Q9BZD7 231 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 RHBGQ9H310 441 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 GAL3ST2Q9H3Q3 398 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 NT5DC2Q9H857 520 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 ASIC3Q9UHC3 531 aa4.29□□□□□ -1.72
VRK1-203ENST00000555067 MRPS18CQ9Y3D5 142 aaKnown RBP4.29□□□□□ -1.72
VRK1-203ENST00000555067 A0A1W2PNU3 283 aaPredicted RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 KDELR3O43731 214 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 FGFR1OPO95684 399 aaKnown RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 IGHG4P01861 327 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 MMP1P03956 469 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 MYOGP15173 224 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 SELEP16581 610 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 HMOX2P30519 316 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 RPL9P32969 192 aaKnown RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 SLC1A2P43004 574 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 CCNG1P51959 295 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 KCNJ2P63252 427 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 GPR176Q14439 515 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 STK38Q15208 465 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 MS4A18Q3C1V0 323 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 HSP90AA4PQ58FG1 418 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 C6orf183Q5T699 404 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 FAHD2BQ6P2I3 314 aaPredicted RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 LRRC31Q6UY01 552 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 Q6ZSR9 355 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 PRSS48Q7RTY5 328 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 PTAR1Q7Z6K3 402 aaPredicted RBP4.28□□□□□ -1.72
VRK1-203ENST00000555067 MARCH9Q86YJ5 346 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 B3GNT7Q8NFL0 401 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 OR51L1Q8NGJ5 315 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 CLHC1Q8NHS4 586 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.28□□□□□ -1.72
VRK1-203ENST00000555067 C8orf44Q96CB5 159 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 FAHD2AQ96GK7 314 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 SYT15Q9BQS2 421 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 MYOZ2Q9NPC6 264 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 IL1RAPQ9NPH3 570 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 NRBP2Q9NSY0 501 aa4.28□□□□□ -1.72
VRK1-203ENST00000555067 PHF11Q9UIL8 331 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms