RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FXYD6P3P58550 94 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 IGLV3-21P80748 117 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 NSDHLQ15738 373 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 HLA-BQ31612 363 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 FAM69BQ5VUD6 431 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 THSD4Q6ZMP0 1018 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF620Q6ZNG0 422 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 ATCAYQ86WG3 371 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 UBALD2Q8IYN6 164 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 GHDCQ8N2G8 530 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LINC00471Q8N535 108 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 PCNPQ8WW12 178 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 NXF5Q9H1B4 397 aaKnown RBP10.74□□□□□ -0.69
SHMT2-212ENST00000554467 HHATLQ9HCP6 504 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 CLCA3PQ9Y6N3 262 aa10.74□□□□□ -0.69
SHMT2-212ENST00000554467 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 PLD2O14939 933 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 MYL12BO14950 172 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 OIP5O43482 229 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 CSO75390 466 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 C1QBP02746 253 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 FPR3P25089 353 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 MED25Q71SY5 747 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 OR4F15Q8NGB8 312 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 MARC2Q969Z3 335 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 RNFT2Q96EX2 444 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 RNF121Q9H920 327 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 DIABLOQ9NR28 239 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 H0YIG0 161 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 SOCS6O14544 535 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 GPX5O75715 221 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 FBLP22087 321 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 ACAA2P42765 397 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 B2MP61769 119 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 FUT7Q11130 342 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 ZBTB37Q5TC79 503 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 KIRREL2Q6UWL6 708 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 C16orf47Q6ZP98 133 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 FAM26EQ8N5C1 309 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 EID2Q8N6I1 236 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 GALNT11Q8NCW6 608 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 FANK1Q8TC84 345 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 SMAP2Q8WU79 429 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 OR52D1Q9H346 318 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 LIN7BQ9HAP6 207 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 TMEM27Q9HBJ8 222 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
SHMT2-212ENST00000554467 SIDT1Q9NXL6 827 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 ZMAT5Q9UDW3 170 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 RPL36Q9Y3U8 105 aaKnown RBP10.73□□□□□ -0.69
SHMT2-212ENST00000554467 CCDC182A6NF36 153 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TSPAN4O14817 238 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 BET1O15155 118 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 KLF4O43474 513 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CSTAP01040 98 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 HBQ1P09105 142 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CSF3P09919 207 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 RUNX1T1Q06455 604 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SSX1Q16384 188 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ALG10BQ5I7T1 473 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 LHFPL3Q86UP9 236 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 D2HGDHQ8N465 521 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 BPIFA2Q96DR5 249 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 FRMD6Q96NE9 622 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ADOQ96SZ5 270 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CD180Q99467 661 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CDCA4Q9BXL8 241 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 UBQLN3Q9H347 655 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF304Q9HCX3 659 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CNOT2Q9NZN8 540 aaKnown RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 I3L521 148 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 AK1P00568 194 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 DRD5P21918 477 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TALDO1P37837 337 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CAV3P56539 151 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CCL7P80098 99 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZMYND11Q15326 602 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CD226Q15762 336 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TMEM201Q5SNT2 666 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 APOOLQ6UXV4 268 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 CPOQ8IVL8 374 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 LRRC17Q8N6Y2 441 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZSCAN1Q8NBB4 408 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 THAP3Q8WTV1 239 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ATOH1Q92858 354 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 OPALINQ96PE5 141 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 SLC38A2Q96QD8 506 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 HCAR1Q9BXC0 346 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF223Q9UK11 482 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-212ENST00000554467 A0A1W2PQM1 296 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 NDUFA2O43678 99 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 TSC22D2O75157 780 aa10.72□□□□□ -0.69
SHMT2-212ENST00000554467 HOXD4P09016 255 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms