RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 TMEM201Q5SNT2 666 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 NANOGP8Q6NSW7 305 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 NUFIP2Q7Z417 695 aaKnown RBP18.13■□□□□ 0.49
FOXA1-203ENST00000553751 MTDHQ86UE4 582 aaKnown RBP18.13■□□□□ 0.49
FOXA1-203ENST00000553751 C3orf49Q96BT1 292 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 LRRC58Q96CX6 371 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 DACH2Q96NX9 599 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 ZNF607Q96SK3 696 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 TACO1Q9BSH4 297 aaKnown RBP18.13■□□□□ 0.49
FOXA1-203ENST00000553751 NANOGQ9H9S0 305 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 TESMINQ9Y4I5 508 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 MPDZO75970 2070 aa18.13■□□□□ 0.49
FOXA1-203ENST00000553751 CCDC168Q8NDH2 2452 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 LOC100653049A0A140TA62 436 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 PRORSD1PA6NEY8 169 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 DNPH1O43598 174 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 GCM2O75603 506 aaPredicted RBP18.12■□□□□ 0.49
FOXA1-203ENST00000553751 KRT34O76011 436 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 IMPDH2P12268 514 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 GZMMP51124 257 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 RASGEF1BQ0VAM2 473 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 CYLC2Q14093 348 aaPredicted RBP18.12■□□□□ 0.49
FOXA1-203ENST00000553751 MMEL1Q495T6 779 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 RABL3Q5HYI8 236 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 TFAP2EQ6VUC0 442 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 OR8J3Q8NGG0 315 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 OR10A6Q8NH74 314 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 ZNF300Q96RE9 604 aaPredicted RBP18.12■□□□□ 0.49
FOXA1-203ENST00000553751 GPATCH1Q9BRR8 931 aaKnown RBP18.12■□□□□ 0.49
FOXA1-203ENST00000553751 RASSF1Q9NS23 344 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 TMEM181Q9P2C4 612 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 TRAPPC4Q9Y296 219 aa18.12■□□□□ 0.49
FOXA1-203ENST00000553751 TMEM229AB2RXF0 380 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 ZNF814B7Z6K7 855 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 C16orf97H3BN30 126 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 SERPINB7O75635 380 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 MFN2O95140 757 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 NPPAP01160 153 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 CXCR1P25024 350 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 HTR2AP28223 471 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 SEC24CP53992 1094 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 DMTNQ08495 405 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 SPATA21Q7Z572 469 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 ATG4DQ86TL0 474 aaPredicted RBP18.11■□□□□ 0.49
FOXA1-203ENST00000553751 STK32CQ86UX6 486 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 ARMC8Q8IUR7 673 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 ZHX1-C8orf76Q96EF9 292 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 OTOGQ6ZRI0 2925 aa18.11■□□□□ 0.49
FOXA1-203ENST00000553751 IGKV3D-15A0A087WSY6 115 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 ZNF716A6NP11 495 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 ZNF724A8MTY0 619 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 PCGF2P35227 344 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 OR2B6P58173 313 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 H3F3AP84243 136 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 BNIP2Q12982 314 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 PDK3Q15120 406 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 STAC2Q6ZMT1 411 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 BEND4Q6ZU67 534 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 SLC30A8Q8IWU4 369 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 BHLHE22Q8NFJ8 381 aaPredicted RBP18.1■□□□□ 0.49
FOXA1-203ENST00000553751 WFIKKN1Q96NZ8 548 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 SH3GL1Q99961 368 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 POTEKPQ9BYX7 375 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 CLEC4MQ9H2X3 399 aaPredicted RBP18.1■□□□□ 0.49
FOXA1-203ENST00000553751 NDRG3Q9UGV2 375 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 ABCA4P78363 2273 aa18.1■□□□□ 0.49
FOXA1-203ENST00000553751 A8MVM7 634 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 RAMP1O60894 148 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 NPIPB7O75200 414 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 OPN1SWP03999 348 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 LSP1P33241 339 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 IDUAP35475 653 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 SLC35A1P78382 337 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 VMACQ2NL98 169 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 CALHM3Q86XJ0 350 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 POU5F2Q8N7G0 328 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 LSMEM1Q8N8F7 131 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 SMYD1Q8NB12 490 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 PCYOX1LQ8NBM8 494 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 RP9Q8TA86 221 aaKnown RBP18.09■□□□□ 0.49
FOXA1-203ENST00000553751 PIGXQ8TBF5 258 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 RCN3Q96D15 328 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 ELAC2Q9BQ52 826 aaKnown RBP18.09■□□□□ 0.49
FOXA1-203ENST00000553751 WFDC6Q9BQY6 131 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 POLDIP3Q9BY77 421 aaKnown RBP18.09■□□□□ 0.49
FOXA1-203ENST00000553751 KLHL4Q9C0H6 718 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 KLHL28Q9NXS3 571 aa18.09■□□□□ 0.49
FOXA1-203ENST00000553751 TESQ9UGI8 421 aaKnown RBP18.09■□□□□ 0.49
FOXA1-203ENST00000553751 FREM1Q5H8C1 2179 aa18.08■□□□□ 0.49
FOXA1-203ENST00000553751 LIPT2A6NK58 231 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 M0QX08 132 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 EIF1BO60739 113 aaKnown RBP18.08■□□□□ 0.48
FOXA1-203ENST00000553751 CCDC22O60826 627 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 GOSR1O95249 250 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 FPR1P21462 350 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 DRD4P21917 467 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 EDNRAP25101 427 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 OR3A2P47893 321 aa18.08■□□□□ 0.48
FOXA1-203ENST00000553751 SLC16A1P53985 500 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms