RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 PLGP00747 810 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-202ENST00000553656 LDLRP01130 860 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 CHRNB4P30926 498 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 IDUAP35475 653 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 DIO1P49895 249 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 OR2B6P58173 313 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 RAC3P60763 192 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 ADORA2A-AS1P86434 159 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 MYBPHQ13203 477 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 NPTX1Q15818 432 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 GTF2IRD2BQ6EKJ0 949 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 C5orf46Q6UWT4 87 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 TMPPEQ6ZT21 453 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 ADGRE4PQ86SQ3 457 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 GTF2IRD2Q86UP8 949 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 DHFR2Q86XF0 187 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 RBM45Q8IUH3 476 aaKnown RBP12.42□□□□□ -0.42
TUBB3-202ENST00000553656 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-202ENST00000553656 C9orf106Q8NAJ2 232 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 STK35Q8TDR2 534 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 ADAMTS16Q8TE57 1224 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 LRGUKQ96M69 825 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 TAPBPLQ9BX59 468 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 POTEKPQ9BYX7 375 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 TRIM15Q9C019 465 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 COQ10BQ9H8M1 238 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 DCAF13Q9NV06 445 aaKnown RBP12.42□□□□□ -0.42
TUBB3-202ENST00000553656 ACTR3BQ9P1U1 418 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 V9GYQ6 96 aa12.42□□□□□ -0.42
TUBB3-202ENST00000553656 A0A0G2JNJ9 132 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CLEC18AA5D8T8 446 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 KDM4EB2RXH2 506 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CHP2O43745 196 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 TPST2O60704 377 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 PRKD3O94806 890 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 PMS2P2O95744 297 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 TGM6O95932 706 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 TMIGD3P0DMS9 266 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 AGAP20933 346 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 ENPP1P22413 925 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 GTF2E2P29084 291 aaKnown RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CDH12P55289 794 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SLC35A1P78382 337 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 TRIM25Q14258 630 aaKnown RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 ZNF239Q16600 458 aaKnown RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 EEF1A1P5Q5VTE0 462 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 PLXDC2Q6UX71 529 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CLEC18BQ6UXF7 455 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SEM1Q6ZVN7 128 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CLEC18CQ8NCF0 446 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CA5BP1Q8WTZ4 195 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SLC38A4Q969I6 547 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SLC7A6OSQ96CW6 309 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 ASB9Q96DX5 294 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SLC41A3Q96GZ6 507 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 CLPTM1LQ96KA5 538 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 ARL5BQ96KC2 179 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 EPYCQ99645 322 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 Q9UFV3 132 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 SLC7A7Q9UM01 511 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 RNF6Q9Y252 685 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 FAM32AQ9Y421 112 aaKnown RBP12.41□□□□□ -0.42
TUBB3-202ENST00000553656 MYO18BQ8IUG5 2567 aa12.41□□□□□ -0.42
TUBB3-202ENST00000553656 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 A0A087WUJ7 227 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 ZC3H12DA2A288 527 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 DVL2O14641 736 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 DNPH1O43598 174 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 RCBTB2O95199 551 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 OR5F1O95221 314 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 GPIP06744 558 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 CTSSP25774 331 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 CEACAM8P31997 349 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 SRSF1Q07955 248 aaKnown RBP eCLIP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 RNPS1Q15287 305 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 TTC33Q6PID6 262 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 CYP2R1Q6VVX0 501 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 FCRLAQ7L513 359 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 SLC43A2Q8N370 569 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 ITLN2Q8WWU7 325 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 ROBO4Q8WZ75 1007 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 POP5Q969H6 163 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 INTS12Q96CB8 462 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 PYURFQ96I23 114 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 MPP4Q96JB8 637 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 PRRC1Q96M27 445 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 NAA11Q9BSU3 229 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 RNF122Q9H9V4 155 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms