RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 COQ10BQ9H8M1 238 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 BARX1Q9HBU1 254 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 SAR1AQ9NR31 198 aa10.49□□□□□ -0.73
CKAP4-202ENST00000552828 LEF1Q9UJU2 399 aaPredicted RBP10.49□□□□□ -0.73
CKAP4-202ENST00000552828 NPIPB9F8W1W9 429 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 H3BNH8 94 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CLIC1O00299 241 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 OIP5O43482 229 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 IFNA2P01563 188 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 C1QCP02747 245 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 GUSBP08236 651 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 PRKCAP17252 672 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 ENPP1P22413 925 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CRATP43155 626 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 OR3A2P47893 321 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 P2RX1P51575 399 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 ATP12AP54707 1039 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 RAC3P60763 192 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 HPCAP84074 193 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 GPR68Q15743 365 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 GTDC1Q4AE62 458 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 GPAT3Q53EU6 434 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 PAGE3Q5JUK9 113 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 COX20Q5RI15 118 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 LRIF1Q5T3J3 769 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 BHLHA15Q7RTS1 189 aaPredicted RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 SPATA21Q7Z572 469 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CPLX4Q7Z7G2 160 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 KBTBD8Q8NFY9 601 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 PHOSPHO1Q8TCT1 267 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF524Q96C55 264 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 ROPN1LQ96C74 230 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 AURKBQ96GD4 344 aaPredicted RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 ELAC2Q9BQ52 826 aaKnown RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 PSD2Q9BQI7 771 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 NMUR2Q9GZQ4 415 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 THUMPD1Q9NXG2 353 aaKnown RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CISD1Q9NZ45 108 aaKnown RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 KLHL9Q9P2J3 617 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CARD8Q9Y2G2 431 aa10.48□□□□□ -0.73
CKAP4-202ENST00000552828 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
CKAP4-202ENST00000552828 A0A096LNT2 108 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 NPIPA5A0A0B4J1W7 369 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 TMEM247A6NEH6 219 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 RNF212BA8MTL3 300 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 NPIPA7E9PJI5 369 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 EBAG9O00559 213 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 FCMRO60667 390 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 CCDC22O60826 627 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 DNAJA2O60884 412 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 RAMP1O60894 148 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 ADAM11O75078 769 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 NDUFS7O75251 213 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 PGM3O95394 542 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 NPIPA8P0DM63 369 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 NR2F1P10589 423 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 COX5AP20674 150 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 PPIBP23284 216 aaKnown RBP10.47□□□□□ -0.73
CKAP4-202ENST00000552828 MVDP53602 400 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 KLF10Q13118 480 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 FADDQ13158 208 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 SELENBP1Q13228 472 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 MAPRE2Q15555 327 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 TOMM34Q15785 309 aaPredicted RBP10.47□□□□□ -0.73
CKAP4-202ENST00000552828 TIMM23BQ5SRD1 257 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 AP1ARQ63HQ0 302 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 P2RY8Q86VZ1 359 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF619Q8N2I2 560 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 DPP10Q8N608 796 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF614Q8N883 585 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 RADILQ96JH8 1075 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 TRNT1Q96Q11 434 aaKnown RBP10.47□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF350Q9GZX5 532 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 RASSF4Q9H2L5 321 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 YAE1D1Q9NRH1 226 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 SLC25A37Q9NYZ2 338 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 SLAMF8Q9P0V8 285 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
CKAP4-202ENST00000552828 MKLN1Q9UL63 735 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 WDR45Q9Y484 360 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 DTNAQ9Y4J8 743 aa10.47□□□□□ -0.73
CKAP4-202ENST00000552828 PRAMEF27A3QJZ7 478 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ZNF724A8MTY0 619 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 A8MV72 311 aaPredicted RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 EVPLLA8MZ36 301 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 GTPBP1O00178 669 aaKnown RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 SLC22A2O15244 555 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 EIF4E2O60573 245 aaKnown RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 CYTIPO60759 359 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 H6PDO95479 791 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 NUDT14O95848 222 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 ETFAP13804 333 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 HOXB9P17482 250 aaPredicted RBP10.46□□□□□ -0.73
CKAP4-202ENST00000552828 DRD4P21917 467 aa10.46□□□□□ -0.73
CKAP4-202ENST00000552828 DSTNP60981 165 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms