RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RP9Q8TA86 221 aaKnown RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 TAMM41Q96BW9 452 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 ZNF300Q96RE9 604 aaPredicted RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 PSD2Q9BQI7 771 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 KCNN3Q9UGI6 736 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
YBX3-212ENST00000542002 PROCRQ9UNN8 238 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 CACNA1CQ13936 2221 aa8.66□□□□□ -1.02
YBX3-212ENST00000542002 MED12LQ86YW9 2145 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 TUBAL3A6NHL2 446 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 ZNF716A6NP11 495 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 BBIP1A8MTZ0 92 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 AIM2O14862 343 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CCDC22O60826 627 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 NPIPB7O75200 414 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 SERPINB7O75635 380 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CTAG2O75638 210 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 PMS2P2O95744 297 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 LGI1O95970 557 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 PLGP00747 810 aaPredicted RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 NPPAP01160 153 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 THY1P04216 161 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 FPR1P21462 350 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 SSTR2P30874 369 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CCKARP32238 428 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 PCGF2P35227 344 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 UGT2B10P36537 528 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CPOXP36551 454 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CPA2P48052 419 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 KCNJ5P48544 419 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CLK1P49759 484 aaKnown RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 OR2B6P58173 313 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 RASGEF1BQ0VAM2 473 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 RNPS1Q15287 305 aaKnown RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 EXOC3L2Q2M3D2 409 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 VMACQ2NL98 169 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CCDC80Q76M96 950 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 GDF7Q7Z4P5 450 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 CPLX4Q7Z7G2 160 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 KRT73Q86Y46 540 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 P3H2Q8IVL5 708 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 SLC15A3Q8IY34 581 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 LSMEM1Q8N8F7 131 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 OR6K3Q8NGY3 331 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 SLC25A43Q8WUT9 341 aaPredicted RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 NRGNQ92686 78 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 SLC35B4Q969S0 331 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 REXO5Q96IC2 774 aaKnown RBP8.65□□□□□ -1.02
YBX3-212ENST00000542002 LURAP1Q96LR2 239 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 ZNF607Q96SK3 696 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 BCO1Q9HAY6 547 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 MCCC2Q9HCC0 563 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 GLRX2Q9NS18 164 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 MRGBPQ9NV56 204 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 TMEM181Q9P2C4 612 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 KLHL13Q9P2N7 655 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 TRAPPC4Q9Y296 219 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 EMC9Q9Y3B6 208 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 HDGFL3Q9Y3E1 203 aa8.65□□□□□ -1.02
YBX3-212ENST00000542002 TACC2O95359 2948 aa8.65□□□□□ -1.03
YBX3-212ENST00000542002 CACNA1DQ01668 2161 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 IGKV1D-42A0A075B6H8 117 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 A0A1B0GWA3 101 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 LIPT2A6NK58 231 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 A8MVM7 634 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 M0R3H8 397 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 SIAH2O43255 324 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 LYPD3O95274 346 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 EPXP11678 715 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 CXCR1P25024 350 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 FKBP2P26885 142 aaKnown RBP8.64□□□□□ -1.03
YBX3-212ENST00000542002 CD79BP40259 229 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 P2RY4P51582 365 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 CTBP2P56545 445 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 COPZ1P61923 177 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 CSNK2A1P68400 391 aaPredicted RBP8.64□□□□□ -1.03
YBX3-212ENST00000542002 SORDQ00796 357 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 CEACAM7Q14002 265 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 DAZAP2Q15038 168 aaPredicted RBP8.64□□□□□ -1.03
YBX3-212ENST00000542002 MAPRE2Q15555 327 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 OR1Q1Q15612 314 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 TSC22D1Q15714 1073 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ABLIM2Q6H8Q1 611 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 TFAP2EQ6VUC0 442 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 STAC2Q6ZMT1 411 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 KIF18BQ86Y91 864 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 SLC43A2Q8N370 569 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 TMEM99Q8N816 258 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 ZIC4Q8N9L1 334 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 PCYOX1LQ8NBM8 494 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 OR52E4Q8NGH9 312 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 OR6T1Q8NGN1 323 aa8.64□□□□□ -1.03
YBX3-212ENST00000542002 FAM222BQ8WU58 562 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms