RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 C1orf185Q5T7R7 199 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 ANXA8L1Q5VT79 327 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 CENPPQ6IPU0 288 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 IGFL3Q6UXB1 125 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 LRRC31Q6UY01 552 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 IL34Q6ZMJ4 242 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 TIFABQ6ZNK6 161 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 C1orf186Q6ZWK4 172 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 ZNF321PQ8N8H1 164 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 LINC01555Q8NAE3 123 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NFAM1Q8NET5 270 aaPredicted RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 PSMG2Q969U7 264 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 OPTNQ96CV9 577 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 MSANTD3Q96H12 275 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 C7orf34Q96L11 122 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 ALS2CR12Q96Q35 445 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 SECISBP2Q96T21 854 aaKnown RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NFKBIZQ9BYH8 718 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 KRT23Q9C075 422 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NTN4Q9HB63 628 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 IL37Q9NZH6 218 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 COX16Q9P0S2 106 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 SPRR3Q9UBC9 169 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 STK38LQ9Y2H1 464 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 PPIAL4AQ9Y536 164 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 GMPPBQ9Y5P6 360 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 BZW2Q9Y6E2 419 aaKnown RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 NUP160Q12769 1436 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NKTRP30414 1462 aaKnown RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 PPRC1Q5VV67 1664 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 C1orf232A0A0U1RR37 186 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ZSCAN5BA6NJL1 495 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 TBL1XO60907 577 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 MMP23AO75900 390 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 TIMP1P01033 207 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 HPNP05981 417 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ASNSP08243 561 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 POU2F1P14859 743 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 TSPAN8P19075 237 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 S100A1P23297 94 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 CFL1P23528 166 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 GABRR1P24046 479 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 PRDX6P30041 224 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 CCR1P32246 355 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 HTR2BP41595 481 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ACAA2P42765 397 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 STARP49675 285 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 STARD6P59095 220 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 UBE2IP63279 158 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 GTF3C1Q12789 2109 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ASPHQ12797 758 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 PLD1Q13393 1074 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 AANATQ16613 207 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 CCDC153Q494R4 210 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 Q6P435 159 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SLC39A4Q6P5W5 647 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ISLR2Q6UXK2 745 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 KDM7AQ6ZMT4 941 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 WDR88Q6ZMY6 472 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 PPP1R27Q86WC6 154 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SERPINA9Q86WD7 417 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ENTHD1Q8IYW4 607 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 Q8N9L7 120 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 DNAAF3Q8N9W5 541 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 CCDC112Q8NEF3 446 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 OR8K1Q8NGG5 319 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 PHOSPHO2Q8TCD6 241 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 NEIL2Q969S2 332 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 FGGYQ96C11 551 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SPXQ9BT56 116 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 WRAP53Q9BUR4 548 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 C9orf16Q9BUW7 83 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 AZI2Q9H6S1 392 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 C12orf10Q9HB07 376 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 MRM3Q9HC36 420 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 C8orf4Q9NR00 106 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.84□□□□□ -1.79
YBX3-210ENST00000540975 NINJ2Q9NZG7 142 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 CNOT2Q9NZN8 540 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 ANKMY1Q9P2S6 941 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 ANGPTL2Q9UKU9 493 aa3.84□□□□□ -1.79
YBX3-210ENST00000540975 SAMD4AQ9UPU9 718 aaKnown RBP3.84□□□□□ -1.79
YBX3-210ENST00000540975 PZPP20742 1482 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 MAGI1Q96QZ7 1491 aaPredicted RBP3.84□□□□□ -1.8
YBX3-210ENST00000540975 MRC2Q9UBG0 1479 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 MAGI3Q5TCQ9 1506 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 ADAMTS12P58397 1594 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 KDM6BO15054 1643 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 TARBP1Q13395 1621 aaKnown RBP3.84□□□□□ -1.8
YBX3-210ENST00000540975 ITSN2Q9NZM3 1697 aa3.84□□□□□ -1.8
YBX3-210ENST00000540975 GOLGA8JA6NMD2 632 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 GOLGA8TH3BQL2 631 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CASKO14936 926 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ALOX5P09917 674 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 PABPC4LP0CB38 370 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 GOLGA8HP0CJ92 632 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 GALP22466 123 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms