RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZBP1Q9H171 429 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MYNNQ9NPC7 610 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 BAIAP2Q9UQB8 552 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GPR52Q9Y2T5 361 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PRELID3BQ9Y3B1 194 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MED31Q9Y3C7 131 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PCDHGA1Q9Y5H4 931 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 DENND4AQ7Z401 1863 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ACACBO00763 2458 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SPTBP11277 2137 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZFHX2Q9C0A1 2572 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 ELOA3DA6NLF2 546 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 SOCS5O75159 536 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SEMA7AO75326 666 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 EIF3GO75821 320 aaKnown RBP eCLIP4.86□□□□□ -1.63
PROM1-220ENST00000540805 H2AFB2P0C5Z0 115 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GSTM3P21266 225 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PTGER1P34995 402 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PBX2P40425 430 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MTNR1BP49286 362 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CDH11P55287 796 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TSPAN5P62079 268 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 RPS26P62854 115 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 HHEXQ03014 270 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 LGALS3BPQ08380 585 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 LRRK1Q38SD2 2015 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZNF791Q3KP31 576 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 ELOA3BQ3SY89 546 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PAN3Q58A45 887 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 FAM71E1Q6IPT2 247 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CD300LDQ6UXZ3 194 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SLC29A4Q7RTT9 530 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 JAZF1Q86VZ6 243 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 DCUN1D3Q8IWE4 304 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 HORMAD2Q8N7B1 307 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SAMD12Q8N8I0 201 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 RELL2Q8NC24 303 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 CHST4Q8NCG5 386 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ELOA3Q8NG57 546 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR2T35Q8NGX2 323 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR6N1Q8NGY5 312 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 RGMAQ96B86 450 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SCRN2Q96FV2 425 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CRB3Q9BUF7 120 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 IFT27Q9BW83 186 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CACNG6Q9BXT2 260 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 STRADBQ9C0K7 418 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 KCNK12Q9HB15 430 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PDE7BQ9NP56 450 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 A4GALTQ9NPC4 353 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GLS2Q9UI32 602 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CSNK1G3Q9Y6M4 447 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 FRYLO94915 3013 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 FEZF1A0PJY2 475 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 NPIPB15A6NHN6 443 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 BLOC1S5-TXNDC5H3BN57 136 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ADAM11O75078 769 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 IL33O95760 270 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ADH1BP00325 375 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 IFNGP01579 166 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 HEXBP07686 556 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CXCR1P25024 350 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PTAFRP25105 342 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GIFP27352 417 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MEOX2P50222 304 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CASP6P55212 293 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PIN1Q13526 163 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 OPCMLQ14982 345 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ST3GAL2Q16842 350 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 C9orf50Q5SZB4 431 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 WASH2PQ6VEQ5 465 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZER1Q7Z7L7 766 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OAFQ86UD1 273 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR4D11Q8NGI4 311 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR9A1PQ8NGU1 263 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SLC38A5Q8WUX1 472 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SPRYD4Q8WW59 207 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 HSD17B8Q92506 261 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 FGF11Q92914 225 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 YIPF5Q969M3 257 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 KCTD12Q96CX2 325 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 ELP4Q96EB1 424 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 F2RL3Q96RI0 385 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 FUZQ9BT04 418 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SARGQ9BW04 601 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TTTY10Q9BZA0 68 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CXorf36Q9H7Y0 433 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PLEKHA1Q9HB21 404 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZNF275Q9NSD4 429 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ACAD8Q9UKU7 415 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 POMT2Q9UKY4 750 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ACSL5Q9ULC5 683 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TMEM5Q9Y2B1 443 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MYOFQ9NZM1 2061 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 IGLV3-16A0A075B6K0 115 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 A0A1B0GV90 55 aa4.85□□□□□ -1.63
PROM1-220ENST00000540805 TMEM200CA6NKL6 621 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms