RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ELOVL5Q9NYP7 299 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 ARMCX1Q9P291 453 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 KLHL9Q9P2J3 617 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 HDGFL3Q9Y3E1 203 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 CCDC168Q8NDH2 2452 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 ZNF716A6NP11 495 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 C16orf97H3BN30 126 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 ZNF208O43345 1280 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 YES1P07947 543 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 UQCRBP14927 111 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 SLC6A2P23975 617 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 HTR2AP28223 471 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 PRKAR1BP31321 381 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 PCYT1AP49585 367 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 GZMMP51124 257 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 PCBP3P57721 371 aaKnown RBP13.39□□□□□ -0.27
UBE3B-212ENST00000540230 OR2B6P58173 313 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-212ENST00000540230 DMTNQ08495 405 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 CYP51A1Q16850 503 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 TRMT5Q32P41 509 aaKnown RBP13.39□□□□□ -0.27
UBE3B-212ENST00000540230 RABL3Q5HYI8 236 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 WBP2NLQ6ICG8 309 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 DHRS4L2Q6PKH6 230 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 NET1Q7Z628 596 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-212ENST00000540230 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
UBE3B-212ENST00000540230 SNX32Q86XE0 403 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 CCDC103Q8IW40 242 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 HIPK4Q8NE63 616 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 OR10A6Q8NH74 314 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 PIF1Q9H611 641 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 TMEM181Q9P2C4 612 aa13.39□□□□□ -0.27
UBE3B-212ENST00000540230 LOC100653049A0A140TA62 436 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 MRASO14807 208 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 KRT34O76011 436 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 OPN1SWP03999 348 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 HRGP04196 525 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 NTF4P34130 210 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 CLK1P49759 484 aaKnown RBP13.38□□□□□ -0.27
UBE3B-212ENST00000540230 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 ZSWIM7Q19AV6 140 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 NANOGP8Q6NSW7 305 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-212ENST00000540230 SMYD1Q8NB12 490 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 ZC3HAV1LQ96H79 300 aaKnown RBP13.38□□□□□ -0.27
UBE3B-212ENST00000540230 NANOGQ9H9S0 305 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-212ENST00000540230 NDRG3Q9UGV2 375 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 PRSS50Q9UI38 385 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 USP22Q9UPT9 525 aa13.38□□□□□ -0.27
UBE3B-212ENST00000540230 VPS13CQ709C8 3753 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 TMEM229AB2RXF0 380 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 TPST2O60704 377 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 MFN2O95140 757 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 THBDP07204 575 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 FPR1P21462 350 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 CXCR1P25024 350 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 SEC24CP53992 1094 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 GYS2P54840 703 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 COPZ1P61923 177 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 H3F3AP84243 136 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 BEND4Q6ZU67 534 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 KRT73Q86Y46 540 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 GABRG1Q8N1C3 465 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 POU5F2Q8N7G0 328 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 C11orf65Q8NCR3 313 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 GPR32P1Q8NGA4 272 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 LRRC58Q96CX6 371 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 MED18Q9BUE0 208 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 ARMC7Q9H6L4 198 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 ITGB1BP2Q9UKP3 347 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 CAPN7Q9Y6W3 813 aa13.37□□□□□ -0.27
UBE3B-212ENST00000540230 CELSR1Q9NYQ6 3014 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 ZNF724A8MTY0 619 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 DEFB108AA8MXU0 73 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 FKBP2P26885 142 aaKnown RBP13.36□□□□□ -0.27
UBE3B-212ENST00000540230 CRYBA2P53672 197 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 RBBP4Q09028 425 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 CEACAM7Q14002 265 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 DUSP7Q16829 419 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 STK32CQ86UX6 486 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 CXorf67Q86X51 503 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-212ENST00000540230 LURAP1LQ8IV03 231 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 SLC35B4Q969S0 331 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 SPATA5L1Q9BVQ7 753 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 TRAPPC4Q9Y296 219 aa13.36□□□□□ -0.27
UBE3B-212ENST00000540230 ZNF469Q96JG9 3925 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-212ENST00000540230 A0A1B0GWA3 101 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 BBIP1A8MTZ0 92 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 M0QX08 132 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 DNPH1O43598 174 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 NPIPB7O75200 414 aa13.35□□□□□ -0.27
UBE3B-212ENST00000540230 PSMB1P20618 241 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms