RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 FAM69AQ5T7M9 428 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RNLSQ5VYX0 342 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RPL13AP3Q6NVV1 102 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF343Q6P1L6 599 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 LANCL3Q6ZV70 420 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CBLL1Q75N03 491 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SYT13Q7L8C5 426 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF546Q86UE3 836 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ARMC10Q8N2F6 343 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF664Q8N3J9 261 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF561Q8N587 486 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 JAGN1Q8N5M9 183 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 FAM169BQ8N8A8 192 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 B3GALNT2Q8NCR0 500 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR6K3Q8NGY3 331 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR56A3Q8NH54 315 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR52I2Q8NH67 350 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR56B4Q8NH76 319 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR5AK3PQ8NH89 298 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TMED6Q8WW62 240 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 FAM46AQ96IP4 442 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 CNTNAP3BQ96NU0 1288 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF587Q96SQ5 575 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 MTERF1Q99551 399 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 SPON2Q9BUD6 331 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 KLHL31Q9H511 634 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OPA3Q9H6K4 179 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 HRASLSQ9HDD0 168 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 HEBP1Q9NRV9 189 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CYSLTR2Q9NS75 346 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TMEM161AQ9NX61 479 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 GDE1Q9NZC3 331 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 PTTG3PQ9NZH4 202 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF223Q9UK11 482 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 FBXO4Q9UKT5 387 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TP53TG5Q9Y2B4 290 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TRIOBPQ9H2D6 2365 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CBY3A6NI87 242 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZAR1LA6NP61 321 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 WASH4PA8MWX3 477 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 C5orf58C9J3I9 102 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 PEX12O00623 359 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 DLEU1O43261 78 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RGS14O43566 566 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 KRT33AO76009 404 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 AGR2O95994 175 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SERPIND1P05546 499 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 STAG3L1P0CL83 205 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SELEP16581 610 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RAB5AP20339 215 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CD80P33681 288 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ACVR1BP36896 505 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 GPR3P46089 330 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ASMTP46597 345 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RENBPP51606 427 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ART1P52961 327 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 UCP3P55916 312 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 WNT4P56705 351 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 CACNG1Q06432 222 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TAF13Q15543 124 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 INPP5JQ15735 1006 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 ARSJQ5FYB0 599 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 ATG9BQ674R7 924 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 B3GNTL1Q67FW5 361 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZC3H14Q6PJT7 736 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF620Q6ZNG0 422 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TMPPEQ6ZT21 453 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 GOLGA7Q7Z5G4 137 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 LRRC28Q86X40 367 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 RTL3Q8N8U3 475 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 RASGEF1AQ8N9B8 481 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 PROKR2Q8NFJ6 384 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 OR4A15Q8NGL6 344 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SECTM1Q8WVN6 248 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SPRYD4Q8WW59 207 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 VWCEQ96DN2 955 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 HPDLQ96IR7 371 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 WFIKKN1Q96NZ8 548 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TCEAL7Q9BRU2 100 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 RSPO3Q9BXY4 272 aaPredicted RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 EPHX3Q9H6B9 360 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 IPPKQ9H8X2 491 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TCF7L1Q9HCS4 588 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SLC2A4RGQ9NR83 387 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 THSD1Q9NS62 852 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ACER3Q9NUN7 267 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 GAR1Q9NY12 217 aaKnown RBP3.44□□□□□ -1.86
MCF2-210ENST00000536274 DOK5Q9P104 306 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 SLC23A2Q9UGH3 650 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 PADI1Q9ULC6 663 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 MED16Q9Y2X0 877 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 ZNF337Q9Y3M9 751 aa3.44□□□□□ -1.86
MCF2-210ENST00000536274 TMEM235A6NFC5 223 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 FAM170BA6NMN3 283 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 MEIS3P2A8K0S8 358 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 BLOC1S5-TXNDC5H3BN57 136 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 EMC8O43402 210 aa3.43□□□□□ -1.86
MCF2-210ENST00000536274 OR10H3O60404 316 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms