RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 MUC15Q8N387 334 aa18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 ZNF525Q8N782 197 aa18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 ROPN1BQ9BZX4 212 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 ROPN1Q9HAT0 212 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 MARCOQ9UEW3 520 aaPredicted RBP18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 MGAT4BQ9UQ53 548 aa18.22■□□□□ 0.51
TSPAN4-219ENST00000530404 TMED7-TICAM2A0A0A6YYA0 188 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 PRSS51A0A1B0GVH4 220 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 A8MV72 311 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 IMPDH2P12268 514 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 MAGEA8P43361 318 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 SLC16A1P53985 500 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 HPCAP84074 193 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 SLC25A3Q00325 362 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 CASP8Q14790 479 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 ANXA8L1Q5VT79 327 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 CLEC2AQ6UVW9 174 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 PHC2Q8IXK0 858 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 ANKFN1Q8N957 763 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 WDR31Q8NA23 367 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 OR10H5Q8NGA6 315 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 ZBTB9Q96C00 473 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 NEURL3Q96EH8 262 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 RADILQ96JH8 1075 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 POLE3Q9NRF9 147 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 TMEM181Q9P2C4 612 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 MALT1Q9UDY8 824 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 TMED7Q9Y3B3 224 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 ATP23Q9Y6H3 246 aa18.21■□□□□ 0.51
TSPAN4-219ENST00000530404 ZC3H12DA2A288 527 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 HMGN4O00479 90 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 GPR171O14626 319 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 SERPINE1P05121 402 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 CHRFAM7AQ494W8 412 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 C6orf52Q5T4I8 152 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 PODNL1Q6PEZ8 512 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 SSX8Q7RTT4 187 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 RNF130Q86XS8 419 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 TEX37Q96LM6 180 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 MUS81Q96NY9 551 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 ZIM3Q96PE6 472 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 SORT1Q99523 831 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 NUF2Q9BZD4 464 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 MANSC1Q9H8J5 431 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 EXOSC3Q9NQT5 275 aaKnown RBP18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC7A10Q9NS82 523 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 UPB1Q9UBR1 384 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 OSGIN1Q9UJX0 560 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 FLVCR1Q9Y5Y0 555 aa18.2■□□□□ 0.5
TSPAN4-219ENST00000530404 LY6HO94772 140 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 CHRM4P08173 479 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 GUSBP08236 651 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 H3F3AP84243 136 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 RAB35Q15286 201 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 TMEM249Q2WGJ8 235 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 FAM174BQ3ZCQ3 159 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 TSPO2Q5TGU0 170 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 VPS37AQ8NEZ2 397 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 TESCQ96BS2 214 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC38A1Q9H2H9 487 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 RAP2CQ9Y3L5 183 aa18.19■□□□□ 0.5
TSPAN4-219ENST00000530404 PDLIM1O00151 329 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 DNPH1O43598 174 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 IFNA2P01563 188 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 BGNP21810 368 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 TACR3P29371 465 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 S100A3P33764 101 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 CDKN2CP42773 168 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC1A6P48664 564 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 RPL14P50914 215 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 POLR2HP52434 150 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 OR7E24Q6IFN5 339 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 DEPDC4Q8N2C3 294 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 PNPT1Q8TCS8 783 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 OIT3Q8WWZ8 545 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 DDIT4LQ96D03 193 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 TNFRSF13CQ96RJ3 184 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 INPP5KQ9BT40 448 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC17A5Q9NRA2 495 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 TRAPPC4Q9Y296 219 aa18.18■□□□□ 0.5
TSPAN4-219ENST00000530404 E9PBE3 544 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 ALDOCP09972 364 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 LBPP18428 481 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 CDH2P19022 906 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 IL12AP29459 219 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 CLK1P49759 484 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 UFM1P61960 85 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC35A1P78382 337 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 COX20Q5RI15 118 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 WDR60Q8WVS4 1066 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 NANOS1Q8WY41 292 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 NAA11Q9BSU3 229 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 AMBRA1Q9C0C7 1298 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 PNPOQ9NVS9 261 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 SLC9A8Q9Y2E8 581 aa18.17■□□□□ 0.5
TSPAN4-219ENST00000530404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.16■□□□□ 0.52e-9■■■■□ 23
TSPAN4-219ENST00000530404 CCDC154A6NI56 674 aa18.16■□□□□ 0.5
TSPAN4-219ENST00000530404 ATP6V1G2-DDX39BF2Z307 99 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms