RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MYBPHQ13203 477 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 PON3Q15166 354 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 NPTX1Q15818 432 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 HSPB2Q16082 182 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 MTX3Q5HYI7 312 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ENTPD8Q5MY95 495 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 EEF1A1P5Q5VTE0 462 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 XKRXQ6PP77 449 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 TMPPEQ6ZT21 453 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 SEM1Q6ZVN7 128 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 P4HA3Q7Z4N8 544 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ZNF808Q8N4W9 903 aaPredicted RBP10.68□□□□□ -0.7
SNF8-215ENST00000515572 OR4D11Q8NGI4 311 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 STK35Q8TDR2 534 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ADAMTS16Q8TE57 1224 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ASB5Q8WWX0 329 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 SLC38A4Q969I6 547 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ASB9Q96DX5 294 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ZHX1-C8orf76Q96EF9 292 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ZNF845Q96IR2 970 aaPredicted RBP10.68□□□□□ -0.7
SNF8-215ENST00000515572 HSH2DQ96JZ2 352 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 WFDC6Q9BQY6 131 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 PRRG4Q9BZD6 226 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 COQ10BQ9H8M1 238 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 TRAPPC4Q9Y296 219 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 MED12LQ86YW9 2145 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 A0A087WUJ7 227 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 A0A1W2PNR3 127 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 CPSF4LA6NMK7 179 aaKnown RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 SULT2B1O00204 365 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 CHP2O43745 196 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 ZG16O60844 167 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 PDE5AO76074 875 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 RCBTB2O95199 551 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 OR5F1O95221 314 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 TGM6O95932 706 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 CRHP06850 196 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 TNFRSF1BP20333 461 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 CHRNB4P30926 498 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 IDUAP35475 653 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 MSX2P35548 267 aaPredicted RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 OR1E2P47887 323 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 DIO1P49895 249 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 TAS2R41P59536 307 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 ZNF239Q16600 458 aaKnown RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 GTF2IRD2BQ6EKJ0 949 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 DEF8Q6ZN54 512 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 VTCN1Q7Z7D3 282 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 MRGPRGQ86SM5 289 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 GTF2IRD2Q86UP8 949 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 C9orf106Q8NAJ2 232 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 OR10Q1Q8NGQ4 319 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 FNDC9Q8TBE3 224 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 RNF217Q8TC41 542 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 MCUR1Q96AQ8 359 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 MPP4Q96JB8 637 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 PRR14Q9BWN1 585 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 OR11A1Q9GZK7 315 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 DIDO1Q9BTC0 2240 aaKnown RBP10.67□□□□□ -0.7
SNF8-215ENST00000515572 TENM4Q6N022 2769 aa10.67□□□□□ -0.7
SNF8-215ENST00000515572 FLNCQ14315 2725 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 A0A0G2JNJ9 132 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 ZC3H12DA2A288 527 aaKnown RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 KDM4EB2RXH2 506 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 EIF1BO60739 113 aaKnown RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 NPIPB7O75200 414 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 PRKD3O94806 890 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 TOXO94900 526 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 AHSA1O95433 338 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 GPIP06744 558 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 TMIGD3P0DMS9 266 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 ENPP1P22413 925 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 CDH12P55289 794 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 SLC35A1P78382 337 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 TRAP1Q12931 704 aaKnown RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 RNPS1Q15287 305 aaKnown RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 C1orf140Q5VVS0 124 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 LCN8Q6JVE9 175 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 LINC00114Q6XXX2 140 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 SLC43A2Q8N370 569 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 RNF128Q8TEB7 428 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 ITLN2Q8WWU7 325 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 PYURFQ96I23 114 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 LRGUKQ96M69 825 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 EPYCQ99645 322 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 SRXN1Q9BYN0 137 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 TRIM15Q9C019 465 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 LRMDAQ9H2I8 198 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms