RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 ADAM29Q9UKF5 820 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 OR14I1A6ND48 311 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PEX12O00623 359 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 PRAF2O60831 178 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 RPL35P42766 123 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SKP1P63208 163 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 FGL2Q14314 439 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 HNRNPA1L2Q32P51 320 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 BEX5Q5H9J7 111 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF836Q6ZNA1 936 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 IL17RCQ8NAC3 791 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ST8SIA4Q92187 359 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 B3GNT4Q9C0J1 378 aa12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-208ENST00000514705 ZSWIM8A7E2V4 1837 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 LIPCP11150 499 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 PRKAR1BP31321 381 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ADAM8P78325 824 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 DUSP5Q16690 384 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 FAM122CQ6P4D5 195 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF576Q9H609 170 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 FBXL2Q9UKC9 423 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 RABL2BQ9UNT1 228 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 NPFFR2Q9Y5X5 522 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 V9GY05 133 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 hCG_1807616A0A1W2PRN6 198 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ATP1B1P05026 303 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ERVK-25P63136 954 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 DCST2Q5T1A1 773 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 HACD4Q5VWC8 232 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 LAMTOR1Q6IAA8 161 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 NLRC3Q7RTR2 1065 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 COMMD2Q86X83 199 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 DIO2Q92813 273 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 OR2AT4A6NND4 320 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 VAMP1P23763 118 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 PBX2P40425 430 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ENPP2Q13822 863 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 MAPK14Q16539 360 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF227Q86WZ6 799 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 OR11H4Q8NGC9 324 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 CASTOR1Q8WTX7 329 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 FGF13Q92913 245 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 MS4A6EQ96DS6 147 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 HCAR1Q9BXC0 346 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 C6orf106Q9H6K1 298 aaPredicted RBP12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 SLC39A1Q9NY26 324 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
TSPAN17-208ENST00000514705 HPXP02790 462 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 MAGEB1P43366 347 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 SHC2P98077 582 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 POU4F2Q12837 409 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 LGALSLQ3ZCW2 172 aaPredicted RBP12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 CD300LDQ6UXZ3 194 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF619Q8N2I2 560 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 LMF1Q96S06 567 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 CENPFP49454 3210 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 OPRD1P41143 372 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 RNLSQ5VYX0 342 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 OR5M10Q6IEU7 315 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 HEPHL1Q6MZM0 1159 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 MFSD12Q6NUT3 480 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 OR7G2Q8NG99 324 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 WDR34Q96EX3 536 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 TVP23AA6NH52 213 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 H7C2Y5 167 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 GREM1O60565 184 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 MAKP20794 623 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 MAP3K8P41279 467 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 CCR9P51686 369 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 RAP2BP61225 183 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 SORDQ00796 357 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 NMNAT3Q96T66 252 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 ATG5Q9H1Y0 275 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 SYNDIG1Q9H7V2 258 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 LIN7BQ9HAP6 207 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 POT1Q9NUX5 634 aa12.85□□□□□ -0.35
TSPAN17-208ENST00000514705 NDUFB2O95178 105 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms