RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 HSD17B8Q92506 261 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 S100PBPQ96BU1 408 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ARL5BQ96KC2 179 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF300Q96RE9 604 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-207ENST00000509102 SPATA9Q9BWV2 254 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-207ENST00000509102 NOSIPQ9Y314 301 aaKnown RBP16.56■□□□□ 0.24
UBE3D-207ENST00000509102 IGKV3D-15A0A087WSY6 115 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.55■□□□□ 0.24
UBE3D-207ENST00000509102 SIAH2O43255 324 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 ADAM11O75078 769 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 GCM2O75603 506 aaPredicted RBP16.55■□□□□ 0.24
UBE3D-207ENST00000509102 THBDP07204 575 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 GKN3PP0CG01 181 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 BMP2P12643 396 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 CD99P14209 185 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 CD53P19397 219 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 MAPK11Q15759 364 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 ACKR1Q16570 336 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 GCNT6Q5T4J0 391 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 TGIF2LYQ8IUE0 185 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 FUNDC1Q8IVP5 155 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 UBE2J2Q8N2K1 259 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 APH1AQ96BI3 265 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF775Q96BV0 537 aaPredicted RBP16.55■□□□□ 0.24
UBE3D-207ENST00000509102 SPATA5L1Q9BVQ7 753 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 POTEKPQ9BYX7 375 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 BCL2L10Q9HD36 194 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 ITPR3Q14573 2671 aa16.55■□□□□ 0.24
UBE3D-207ENST00000509102 A0A1W2PP18 115 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 A0A1W2PPR1 153 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 TMEM72A0PK05 275 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 ARHGEF9O43307 516 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 SMPD2O60906 423 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 MRPL33O75394 65 aaKnown RBP16.54■□□□□ 0.24
UBE3D-207ENST00000509102 GPIP06744 558 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 ETS2P15036 469 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 IDUAP35475 653 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 CAPRIN1Q14444 709 aaKnown RBP16.54■□□□□ 0.24
UBE3D-207ENST00000509102 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-207ENST00000509102 MAL2Q969L2 176 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 SLC35B4Q969S0 331 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 DNAJA3Q96EY1 480 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 PLPPR2Q96GM1 343 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 CCL19Q99731 98 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 ADAM19Q9H013 955 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 ESRP2Q9H6T0 727 aaKnown RBP16.54■□□□□ 0.24
UBE3D-207ENST00000509102 NPHS2Q9NP85 383 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 PARPBPQ9NWS1 579 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 DCTN4Q9UJW0 460 aa16.54■□□□□ 0.24
UBE3D-207ENST00000509102 ING1Q9UK53 422 aaPredicted RBP16.54■□□□□ 0.24
UBE3D-207ENST00000509102 MAP1AP78559 2803 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-207ENST00000509102 ANGPT2O15123 496 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 PGM3O95394 542 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 NUDT7P0C024 238 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 SLC16A1P53985 500 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 REEP3Q6NUK4 255 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF704Q6ZNC4 412 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-207ENST00000509102 C22orf34Q6ZV56 151 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 MUCL1Q96DR8 90 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 THOC1Q96FV9 657 aaKnown RBP16.53■□□□□ 0.24
UBE3D-207ENST00000509102 HS3ST6Q96QI5 342 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 MRGBPQ9NV56 204 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 SLC25A37Q9NYZ2 338 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 RPS6KB2Q9UBS0 482 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 PRSS50Q9UI38 385 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 LEF1Q9UJU2 399 aaPredicted RBP16.53■□□□□ 0.24
UBE3D-207ENST00000509102 SLC13A4Q9UKG4 626 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 SLC9A8Q9Y2E8 581 aa16.53■□□□□ 0.24
UBE3D-207ENST00000509102 A0A0G2JND7 137 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF716A6NP11 495 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 A8MVM7 634 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF814B7Z6K7 855 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 KLF4O43474 513 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 EDF1O60869 148 aaKnown RBP16.52■□□□□ 0.24
UBE3D-207ENST00000509102 LYZL6O75951 148 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 HOXB9P17482 250 aaPredicted RBP16.52■□□□□ 0.24
UBE3D-207ENST00000509102 KLK2P20151 261 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 SLC6A2P23975 617 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 ACAA2P42765 397 aaKnown RBP16.52■□□□□ 0.24
UBE3D-207ENST00000509102 CDK6Q00534 326 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 TSC22D1Q15714 1073 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 STK11Q15831 433 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 PAGE3Q5JUK9 113 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 FBXW9Q5XUX1 488 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 PAQR6Q6TCH4 344 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 P2RY8Q86VZ1 359 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 P3H2Q8IVL5 708 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 CLIP4Q8N3C7 705 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 NFKBIDQ8NI38 313 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF607Q96SK3 696 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 VAPAQ9P0L0 249 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 GMEB1Q9Y692 573 aa16.52■□□□□ 0.24
UBE3D-207ENST00000509102 CIB4A0PJX0 185 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 PRORSD1PA6NEY8 169 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 SERPINB7O75635 380 aa16.51■□□□□ 0.23
UBE3D-207ENST00000509102 ARAFP10398 606 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms