RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 OR2A2Q6IF42 318 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 TMPPEQ6ZT21 453 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 TSPYL5Q86VY4 417 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-210ENST00000506941 RNF148Q8N7C7 305 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 VANGL1Q8TAA9 524 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-210ENST00000506941 RNF128Q8TEB7 428 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 RASSF5Q8WWW0 418 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 NSL1Q96IY1 281 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 KCTD14Q9BQ13 255 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-210ENST00000506941 SFXN3Q9BWM7 321 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 PRRG4Q9BZD6 226 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 TRIM2Q9C040 744 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 EVA1AQ9H8M9 152 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 KCNJ16Q9NPI9 418 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 TIGARQ9NQ88 270 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 NPDC1Q9NQX5 325 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-210ENST00000506941 ADA2Q9NZK5 511 aa16.25■□□□□ 0.19
NPHP4-210ENST00000506941 SULT2B1O00204 365 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 SMAD9O15198 467 aaKnown RBP16.24■□□□□ 0.19
NPHP4-210ENST00000506941 PMS2P2O95744 297 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 IMPDH2P12268 514 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 ENPP1P22413 925 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 OPRM1P35372 400 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 KIR2DL2P43627 348 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-210ENST00000506941 CLK1P49759 484 aaKnown RBP16.24■□□□□ 0.19
NPHP4-210ENST00000506941 NCALDP61601 193 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 OR1Q1Q15612 314 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 VWA1Q6PCB0 445 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 C6orf89Q6UWU4 347 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 FCRLAQ7L513 359 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 RANBP3LQ86VV4 465 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-210ENST00000506941 ABHD3Q8WU67 409 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 DDIT4LQ96D03 193 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 RPS6KB2Q9UBS0 482 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 CLEC4AQ9UMR7 237 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 HDGFL3Q9Y3E1 203 aa16.24■□□□□ 0.19
NPHP4-210ENST00000506941 A0A0B4J2E0 115 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 A0A1B0GX12 115 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 FMO6PO60774 539 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 CRHP06850 196 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 NCK1P16333 377 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 FKBP2P26885 142 aaKnown RBP16.23■□□□□ 0.19
NPHP4-210ENST00000506941 MAP2K6P52564 334 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 SIRPAP78324 504 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 EGR4Q05215 589 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 DEFB107AQ8IZN7 70 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 CNEP1R1Q8N9A8 125 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 FAM156AQ8NDB6 213 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 RBM15BQ8NDT2 890 aaKnown RBP16.23■□□□□ 0.19
NPHP4-210ENST00000506941 STARD4Q96DR4 205 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 CDRT15Q96T59 188 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 MCHR1Q99705 422 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 JKAMPQ9P055 326 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 CD300AQ9UGN4 299 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 UNC79Q9P2D8 2635 aa16.23■□□□□ 0.19
NPHP4-210ENST00000506941 B2RBV5 119 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 ZNF814B7Z6K7 855 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 GSTA4O15217 222 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 SS18L1O75177 396 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-210ENST00000506941 NPIPB7O75200 414 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 IFNA14P01570 189 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 THY1P04216 161 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 GGT1P19440 569 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 MNAT1P51948 309 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 CSNK2A1P68400 391 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-210ENST00000506941 MXRA7P84157 204 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 ALG10BQ5I7T1 473 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 ENTPD8Q5MY95 495 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 ULK3Q6PHR2 472 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 C16orf89Q6UX73 402 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 RINLQ6ZS11 566 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 TRPM8Q7Z2W7 1104 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 BTLAQ7Z6A9 289 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 CARM1Q86X55 608 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 DNAJA4Q8WW22 397 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-210ENST00000506941 PROX1Q92786 737 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 SLC38A4Q969I6 547 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 GMPPAQ96IJ6 420 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-210ENST00000506941 POTEKPQ9BYX7 375 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 PCDHAC1Q9H158 963 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 C12orf10Q9HB07 376 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 TMEM27Q9HBJ8 222 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 EGFL7Q9UHF1 273 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 ING1Q9UK53 422 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-210ENST00000506941 BAG5Q9UL15 447 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 TRAPPC4Q9Y296 219 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 SH3GLB1Q9Y371 365 aa16.22■□□□□ 0.19
NPHP4-210ENST00000506941 IGKV1D-42A0A075B6H8 117 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ELOA3DA6NLF2 546 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-210ENST00000506941 CPSF4LA6NMK7 179 aaKnown RBP16.21■□□□□ 0.19
NPHP4-210ENST00000506941 A8MVM7 634 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 EEF1E1-BLOC1S5C9J1V9 151 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 EEF1E1O43324 174 aaKnown RBP16.21■□□□□ 0.19
NPHP4-210ENST00000506941 LYPD3O95274 346 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 CGAP01215 116 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 HSD17B1P14061 328 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 TCN1P20061 433 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-210ENST00000506941 CALB2P22676 271 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 OR1E2P47887 323 aa16.21■□□□□ 0.19
NPHP4-210ENST00000506941 ASCL1P50553 236 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms