RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PRKCGP05129 697 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 HOXB2P14652 356 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 NQO2P16083 231 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 TNFRSF1BP20333 461 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 MAKP20794 623 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 C4BPBP20851 252 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 GIFP27352 417 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 SLC1A2P43004 574 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 QARSP47897 775 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ZFP36L2P47974 494 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 EMDP50402 254 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ABCE1P61221 599 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 Q0VFX4 171 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 FOXE3Q13461 319 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 C18orf21Q32NC0 220 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 LSM12Q3MHD2 195 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 XKR4Q5GH76 650 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 LY6G6FQ5SQ64 297 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 C22orf42Q6IC83 251 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 FRA10AC1Q70Z53 315 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 APTXQ7Z2E3 356 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 RD3Q7Z3Z2 195 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 PIP4P1Q86T03 277 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF843Q8N446 348 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ZSCAN4Q8NAM6 433 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 FBXL13Q8NEE6 735 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 AENQ8WTP8 325 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 SMAP2Q8WU79 429 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 NAT6Q93015 286 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 PLEKHA8Q96JA3 519 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 CNN2Q99439 309 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 MAPKAP1Q9BPZ7 522 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 GPR174Q9BXC1 333 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 HDHD2Q9H0R4 259 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 Q9HAA7 133 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 EURLQ9NYK6 297 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ELOVL5Q9NYP7 299 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 IFNKQ9P0W0 207 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 MYEF2Q9P2K5 600 aaKnown RBP5.23□□□□□ -1.57
BRCA1-224ENST00000497488 ZNHIT2Q9UHR6 403 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 NUP50Q9UKX7 468 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 BTAF1O14981 1849 aa5.23□□□□□ -1.57
BRCA1-224ENST00000497488 RGPD3A6NKT7 1758 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 RGPD4Q7Z3J3 1758 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 IGLV5-37A0A075B6J1 123 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 IGLV5-39A0A0G2JS06 123 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 TMEM120BA0PK00 339 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 A8MUA0 341 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PROP1O75360 226 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 AP2A1O95782 977 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 NR3C1P04150 777 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 MYL2P10916 166 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 RPL35AP18077 110 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 IL32P24001 234 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 DCKP27707 260 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 ID1P41134 155 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 CRATP43155 626 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 ART1P52961 327 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PSMD4P55036 377 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 ATP5J2P56134 94 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GSCP56915 257 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PROK1P58294 105 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 RPS6P62753 249 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 MRPS15P82914 257 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SIGLEC14Q08ET2 396 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GAGE5Q13069 117 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GAGE6Q13070 117 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SELENBP1Q13228 472 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GPR17Q13304 367 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 VAMP3Q15836 100 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PRTGQ2VWP7 1150 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SIRPB2Q5JXA9 342 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 C9orf135Q5VTT2 229 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SLC16A14Q7RTX9 510 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PIGZQ86VD9 579 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 DCUN1D3Q8IWE4 304 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SELENOHQ8IZQ5 122 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 LRRC75AQ8NAA5 344 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 OR4D9Q8NGE8 314 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 OR52I1Q8NGK6 324 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GPR151Q8TDV0 419 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 NTNG2Q96CW9 530 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GLT1D1Q96MS3 346 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 OPALINQ96PE5 141 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 TSSK3Q96PN8 268 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 OVOL2Q9BRP0 275 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 RHNO1Q9BSD3 238 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PPA2Q9H2U2 334 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GOLPH3Q9H4A6 298 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 BICC1Q9H694 974 aaKnown RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 NIPAL2Q9H841 368 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SDHAF3Q9NRP4 125 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 TXLNGQ9NUQ3 528 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 GPATCH2LQ9NWQ4 482 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 TEX10Q9NXF1 929 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-224ENST00000497488 SCML2Q9UQR0 700 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 TCF19Q9Y242 345 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 PPP2R2CQ9Y2T4 447 aa5.22□□□□□ -1.57
BRCA1-224ENST00000497488 OARD1Q9Y530 152 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms