RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TMED7Q9Y3B3 224 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 USF3Q68DE3 2245 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 DSPPQ9NZW4 1301 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 NIPBLQ6KC79 2804 aaeCLIP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 IGKV3D-15A0A087WSY6 115 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 A0A1W2PR80 420 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CDHR4A6H8M9 788 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CFAP73A6NFT4 308 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 TRIM64A6NGJ6 449 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 TRIM64BA6NI03 449 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF724A8MTY0 619 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HS3ST1O14792 307 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CLOCKO15516 846 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ANP32DO95626 131 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 PMS2P2O95744 297 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 DBIP07108 87 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 INHBBP09529 407 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ADSLP30566 484 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ACAA2P42765 397 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 PTH2RP49190 550 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 POLR2HP52434 150 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 NR1H2P55055 460 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 DSTNP60981 165 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CSNK2A1P68400 391 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HOXC5Q00444 222 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 EPS8Q12929 822 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 BNIP2Q12982 314 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 P2RY6Q15077 328 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 STK11Q15831 433 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 C6orf10Q5SRN2 563 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 NCMAPQ5T1S8 102 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 Q6ZT83 130 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 YTHDF3Q7Z739 585 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 GALNT5Q7Z7M9 940 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 MSRB3Q8IXL7 192 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CMIPQ8IY22 773 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF100Q8IYN0 542 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 C10orf111Q8N326 155 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 MIER2Q8N344 545 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 OR52E4Q8NGH9 312 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 SLC25A43Q8WUT9 341 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 OIT3Q8WWZ8 545 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 GTF2H4Q92759 462 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HPS1Q92902 700 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 MAL2Q969L2 176 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 TMEM19Q96HH6 336 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ITCHQ96J02 903 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 C18orf12Q96KH6 178 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HDHD5Q9BXW7 423 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 FANCFQ9NPI8 374 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 SLC25A37Q9NYZ2 338 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 NPAP1Q9NZP6 1156 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 SLAMF8Q9P0V8 285 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 TMEM181Q9P2C4 612 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 P2RX2Q9UBL9 471 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 NOSIPQ9Y314 301 aaKnown RBP7.54□□□□□ -1.2
LRCH3-219ENST00000494069 HDGFL3Q9Y3E1 203 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 PCDHB14Q9Y5E9 798 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 CADP27708 2225 aa7.54□□□□□ -1.2
LRCH3-219ENST00000494069 FAM234BA2RU67 622 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 H7C1Q1 480 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 CLIC1O00299 241 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 FRS3O43559 492 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 F12P00748 615 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 FOSL1P15407 271 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 COX5AP20674 150 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 PTNP21246 168 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 SLC1A3P43003 542 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 ANXA11P50995 505 aaKnown RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 H3F3AP84243 136 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 BSPH1Q075Z2 132 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 LRRC74AQ0VAA2 488 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 PAGE3Q5JUK9 113 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 C9orf135Q5VTT2 229 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 ADAM5Q6NVV9 412 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 PEX5LQ8IYB4 626 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 UBE2J2Q8N2K1 259 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 CADM2Q8N3J6 435 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF433Q8N7K0 673 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF611Q8N823 705 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 KBTBD8Q8NFY9 601 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 HSD17B8Q92506 261 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 THOC1Q96FV9 657 aaKnown RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 C7orf26Q96N11 449 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 TACO1Q9BSH4 297 aaKnown RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 POTEKPQ9BYX7 375 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 RMND5AQ9H871 391 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 SLC52A3Q9NQ40 469 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 TCF7L2Q9NQB0 619 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF443Q9Y2A4 671 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-219ENST00000494069 RNF115Q9Y4L5 304 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms