RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 EPYCQ99645 322 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 TUBA1CQ9BQE3 449 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 WFDC6Q9BQY6 131 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 FNDC11Q9BVV2 318 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 AMBRA1Q9C0C7 1298 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 POMPQ9Y244 141 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 HDGFL3Q9Y3E1 203 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 A0A0J9YW62 118 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 A0A1W2PNR3 127 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 SLC22A20A6NK97 555 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 CLCA1A8K7I4 914 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 TMEM229AB2RXF0 380 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 PYCARD-AS1I3L0S3 204 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 SULT2B1O00204 365 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 ACOT8O14734 319 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 EFNA2O43921 213 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 CXCL13O43927 109 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 TPST2O60704 377 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 WISP1O95388 367 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 AHSA1O95433 338 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 THRBP10828 461 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 FCGR2AP12318 317 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 HOXB6P17509 224 aaKnown RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 IDUAP35475 653 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 YAP1P46937 504 aaKnown RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 SUCLG1P53597 346 aaKnown RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 FOXD4Q12950 439 aaPredicted RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 PIN1Q13526 163 aaPredicted RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 ACSF3Q4G176 576 aaPredicted RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 C4orf17Q53FE4 359 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 EMC4Q5J8M3 183 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 TTC33Q6PID6 262 aaPredicted RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 GDF7Q7Z4P5 450 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 FJX1Q86VR8 437 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 ZDHHC21Q8IVQ6 265 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 STK35Q8TDR2 534 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 OSTF1Q92882 214 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 WNT2BQ93097 391 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 SLC38A4Q969I6 547 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 CPNE4Q96A23 557 aaPredicted RBP10.24□□□□□ -0.77
NUP50-216ENST00000486184 MPP4Q96JB8 637 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 OR11A1Q9GZK7 315 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 MAGIXQ9H6Y5 334 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 RIMS3Q9UJD0 308 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 AURKCQ9UQB9 309 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 ENPP4Q9Y6X5 453 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 DOCK7Q96N67 2140 aa10.24□□□□□ -0.77
NUP50-216ENST00000486184 A0A087WUJ7 227 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 TCRBV5S2A0A599 114 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 DHRS12A0PJE2 317 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 E9PLN8 166 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 H0YC42 278 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 ADAMDEC1O15204 470 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 LRRTM2O43300 516 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 PMS2P2O95744 297 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 IL2RAP01589 272 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 GPIP06744 558 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 UMPSP11172 480 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 RHCEP18577 417 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 SHC1P29353 583 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 DIO1P49895 249 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
NUP50-216ENST00000486184 OR2B6P58173 313 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 SLC35A1P78382 337 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 MYBPHQ13203 477 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 TRAM2Q15035 370 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 PON3Q15166 354 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 C1orf140Q5VVS0 124 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 NSUN5P2Q63ZY6 315 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 RPTNQ6XPR3 784 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 RRM2BQ7LG56 351 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 MCEMP1Q8IX19 187 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 OFCC1Q8IZS5 231 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 C10orf53Q8N6V4 93 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
NUP50-216ENST00000486184 DNAJA3Q96EY1 480 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 ZNF845Q96IR2 970 aaPredicted RBP10.23□□□□□ -0.77
NUP50-216ENST00000486184 ZNF300Q96RE9 604 aaPredicted RBP10.23□□□□□ -0.77
NUP50-216ENST00000486184 ZNF347Q96SE7 839 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 TM9SF2Q99805 663 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 VKORC1Q9BQB6 163 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 TMEM43Q9BTV4 400 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 POTEKPQ9BYX7 375 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 YY1AP1Q9H869 796 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 CALHM2Q9HA72 323 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 C6orf203Q9P0P8 240 aaPredicted RBP10.23□□□□□ -0.77
NUP50-216ENST00000486184 RHCGQ9UBD6 479 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 SLC5A6Q9Y289 635 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 MEMO1Q9Y316 297 aa10.23□□□□□ -0.77
NUP50-216ENST00000486184 NBASA2RRP1 2371 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 TRAV36DV7A0A075B6V5 113 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 ZC3H12DA2A288 527 aaKnown RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 CD8B2A6NJW9 211 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 J3KTA2 159 aa10.22□□□□□ -0.77
NUP50-216ENST00000486184 KPNA4O00629 521 aaPredicted RBP10.22□□□□□ -0.77
NUP50-216ENST00000486184 DNPH1O43598 174 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms