RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 THBDP07204 575 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 CHRM4P08173 479 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 INHBBP09529 407 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 BMP4P12644 408 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 NCF2P19878 526 aaPredicted RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 TACR3P29371 465 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 IDUAP35475 653 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 CASP9P55211 416 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 EPS8Q12929 822 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 TAB1Q15750 504 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 ANKRD34AQ69YU3 496 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 EPGNQ6UW88 154 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 NUFIP2Q7Z417 695 aaKnown RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 ANKFN1Q8N957 763 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 OR52P1PQ8NH57 321 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 ZNF317Q96PQ6 595 aaPredicted RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 TAPBPLQ9BX59 468 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 GRIP2Q9C0E4 1043 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 QRSL1Q9H0R6 528 aaKnown RBP10.15□□□□□ -0.78
CCM2-213ENST00000480658 ALG2Q9H553 416 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 C12orf10Q9HB07 376 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 BCL2L10Q9HD36 194 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 TRIM33Q9UPN9 1127 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 TMED7Q9Y3B3 224 aa10.15□□□□□ -0.78
CCM2-213ENST00000480658 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 IGHV3-15A0A0B4J1V0 119 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 CENPVL1A0A0U1RR11 272 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 A0A1W2PPR1 153 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 PRORSD1PA6NEY8 169 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 OR5H1A6NKK0 313 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 A8MVM7 634 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 PGM3O95394 542 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 GSNP06396 782 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 TFPTP0C1Z6 253 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 BMP2P12643 396 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 ETS2P15036 469 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 GTF2E2P29084 291 aaKnown RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 IL12AP29459 219 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 CDKN2CP42773 168 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 RNF144AP50876 292 aaPredicted RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 ATP4BP51164 291 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 OR2B6P58173 313 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 H3F3AP84243 136 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 STK11Q15831 433 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 SLC9B1Q4ZJI4 515 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 NCMAPQ5T1S8 102 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 HDXQ7Z353 690 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 YTHDF3Q7Z739 585 aaKnown RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 ADGRG3Q86Y34 549 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 POMGNT2Q8NAT1 580 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 WFDC11Q8NEX6 87 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 PNPT1Q8TCS8 783 aaKnown RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 SLC38A5Q8WUX1 472 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 AKAP1Q92667 903 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCM2-213ENST00000480658 TMEM45BQ96B21 275 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 INPP5KQ9BT40 448 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 SPATA9Q9BWV2 254 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 BARX1Q9HBU1 254 aaPredicted RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 A4GALTQ9NPC4 353 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 OBP2BQ9NPH6 170 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 ZNF701Q9NV72 531 aaPredicted RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 UPB1Q9UBR1 384 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 OSGIN1Q9UJX0 560 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 ZNF443Q9Y2A4 671 aaPredicted RBP10.14□□□□□ -0.79
CCM2-213ENST00000480658 GMEB1Q9Y692 573 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 MED12Q93074 2177 aa10.14□□□□□ -0.79
CCM2-213ENST00000480658 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 A0A1W2PP18 115 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 CIB4A0PJX0 185 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 CCT8L1PA6NM43 557 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF716A6NP11 495 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 EVPLLA8MZ36 301 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF814B7Z6K7 855 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 CLOCKO15516 846 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 OR2T1O43869 369 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ETFAP13804 333 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 PTAFRP25105 342 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 LOXP28300 417 aaPredicted RBP10.13□□□□□ -0.79
CCM2-213ENST00000480658 PRKAR1BP31321 381 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 PTH2RP49190 550 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 NCALDP61601 193 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 MFSD13AQ14CX5 517 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 RGNQ15493 299 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 NRF1Q16656 503 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF672Q499Z4 452 aaPredicted RBP10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF311Q5JNZ3 666 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 KLHL24Q6TFL4 600 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 STK35Q8TDR2 534 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 CNOT9Q92600 299 aaKnown RBP10.13□□□□□ -0.79
CCM2-213ENST00000480658 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 COX4I2Q96KJ9 171 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF300Q96RE9 604 aaPredicted RBP10.13□□□□□ -0.79
CCM2-213ENST00000480658 ZNF607Q96SK3 696 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 KLHDC3Q9BQ90 382 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 ADAM19Q9H013 955 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 SELENONQ9NZV5 590 aa10.13□□□□□ -0.79
CCM2-213ENST00000480658 RPS6KB2Q9UBS0 482 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms