RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SHQ1Q6PI26 577 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 ESPNLQ6ZVH7 1005 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 GGNQ86UU5 652 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 GHDCQ8N2G8 530 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR5M1Q8NGP8 315 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR5K1Q8NHB7 308 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 SNRNP40Q96DI7 357 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 PTDSS2Q9BVG9 487 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 OSBPL10Q9BXB5 764 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 GABARAPL1Q9H0R8 117 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 DEFB127Q9H1M4 99 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 COQ10BQ9H8M1 238 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 KRCC1Q9NPI7 259 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 MEPEQ9NQ76 525 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 SPRR3Q9UBC9 169 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 NPIPA1Q9UND3 350 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 SLC6A5Q9Y345 797 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 MED31Q9Y3C7 131 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 HDGFL3Q9Y3E1 203 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 SVILO95425 2214 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZC3H12DA2A288 527 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 H0Y3Z8 333 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 H3BML4 177 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR2T1O43869 369 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 E2F6O75461 281 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 PMS2P2O95744 297 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 CPN1P15169 458 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 IST1P53990 364 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 PRKCDQ05655 676 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 MICAQ29983 383 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 CTU2Q2VPK5 515 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 FAM69AQ5T7M9 428 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 C1orf140Q5VVS0 124 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF770Q6IQ21 691 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 POMZP3Q6PJE2 187 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF730Q6ZMV8 503 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM179BQ7Z7N9 219 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 AMIGO2Q86SJ2 522 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 CHERPQ8IWX8 916 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 NRMQ8IXM6 262 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 LIPHQ8WWY8 451 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 MIB2Q96AX9 1013 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TSPAN10Q9H1Z9 355 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRAPPC4Q9Y296 219 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 U3KQV3 271 aa11.29□□□□□ -0.6
TRAPPC12-218ENST00000479897 FTCDNL1E5RQL4 147 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 KLF4O43474 513 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 PIP5K1CO60331 668 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 CCNB2O95067 398 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 AHSA1O95433 338 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 MT-ATP6P00846 226 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 BGLAPP02818 100 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 EDN3P14138 238 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 SHC1P29353 583 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 IDUAP35475 653 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 IFNGR2P38484 337 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 OMPP47874 163 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 ARHGDIAP52565 204 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF74Q16587 644 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 C1orf94Q6P1W5 598 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 PGBD2Q6P3X8 592 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMPPEQ6ZT21 453 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMPRSS11FQ6ZWK6 438 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 SLC46A3Q7Z3Q1 461 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR10G2Q8NGC3 310 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 PFN4Q8NHR9 129 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 PIGXQ8TBF5 258 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 GIPC3Q8TF64 312 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 TIMP4Q99727 224 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 EXO5Q9H790 373 aa11.28□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM185BQ9H7F4 350 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms