RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 MSRB3Q8IXL7 192 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 GABRG1Q8N1C3 465 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 STEAP2Q8NFT2 490 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 FOXC2Q99958 501 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 NAA11Q9BSU3 229 aaPredicted RBP11.27□□□□□ -0.61
C9orf85-204ENST00000473252 KLHL4Q9C0H6 718 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 PIF1Q9H611 641 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 C12orf10Q9HB07 376 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 ZNF446Q9NWS9 450 aa11.27□□□□□ -0.61
C9orf85-204ENST00000473252 ING1Q9UK53 422 aaPredicted RBP11.27□□□□□ -0.61
C9orf85-204ENST00000473252 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 PRORSD1PA6NEY8 169 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 SERPINB7O75635 380 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 NPPAP01160 153 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 FESP07332 822 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 DNASE1P24855 282 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 CXCR1P25024 350 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 OR3A2P47893 321 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 IST1P53990 364 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 EXOC3L2Q2M3D2 409 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 COQ5Q5HYK3 327 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 RPS26P11Q5JNZ5 115 aaPredicted RBP11.26□□□□□ -0.61
C9orf85-204ENST00000473252 SFRP5Q5T4F7 317 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 DHRS4L2Q6PKH6 230 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 PAMR1Q6UXH9 720 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 Q6ZT83 130 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 NUFIP2Q7Z417 695 aaKnown RBP11.26□□□□□ -0.61
C9orf85-204ENST00000473252 GALNT5Q7Z7M9 940 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 SLC30A8Q8IWU4 369 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 CLIP4Q8N3C7 705 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 HIPK4Q8NE63 616 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 MAL2Q969L2 176 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 ZNF607Q96SK3 696 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 C12orf49Q9H741 205 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 KLHL28Q9NXS3 571 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
C9orf85-204ENST00000473252 ITGB1BP2Q9UKP3 347 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 CHST2Q9Y4C5 530 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
C9orf85-204ENST00000473252 IGHV3-15A0A0B4J1V0 119 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 ZNF716A6NP11 495 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 A8MVM7 634 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 DEFB108AA8MXU0 73 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 GCM2O75603 506 aaPredicted RBP11.25□□□□□ -0.61
C9orf85-204ENST00000473252 RAF1P04049 648 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 GPIP06744 558 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 GKN3PP0CG01 181 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 ARFIP2P53365 341 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 NR1H2P55055 460 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 ITGADQ13349 1161 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 SCARB2Q14108 478 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 MAPRE2Q15555 327 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 C5orf46Q6UWT4 87 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 DHDDSQ86SQ9 333 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 LSMEM1Q8N8F7 131 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 STK35Q8TDR2 534 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 THOC1Q96FV9 657 aaKnown RBP11.25□□□□□ -0.61
C9orf85-204ENST00000473252 CGREF1Q99674 301 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 CPPED1Q9BRF8 314 aaPredicted RBP11.25□□□□□ -0.61
C9orf85-204ENST00000473252 SF3B5Q9BWJ5 86 aaKnown RBP11.25□□□□□ -0.61
C9orf85-204ENST00000473252 TMEM120AQ9BXJ8 343 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 ACTR6Q9GZN1 396 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 ANGPT4Q9Y264 503 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
C9orf85-204ENST00000473252 BBIP1A8MTZ0 92 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 SLC22A2O15244 555 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 IMPDH2P12268 514 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 IDUAP35475 653 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 OR2B6P58173 313 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 NFYCQ13952 458 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 C1QTNF12Q5T7M4 302 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 C6orf89Q6UWU4 347 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 SERPINA11Q86U17 422 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 CADM2Q8N3J6 435 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 C11orf65Q8NCR3 313 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 NFKBIDQ8NI38 313 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 DNAJA4Q8WW22 397 aaPredicted RBP11.24□□□□□ -0.61
C9orf85-204ENST00000473252 HSD17B8Q92506 261 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 KISS1RQ969F8 398 aaPredicted RBP11.24□□□□□ -0.61
C9orf85-204ENST00000473252 ALPK1Q96QP1 1244 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 ZNF300Q96RE9 604 aaPredicted RBP11.24□□□□□ -0.61
C9orf85-204ENST00000473252 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 OR11A1Q9GZK7 315 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 NGBQ9NPG2 151 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 PARPBPQ9NWS1 579 aa11.24□□□□□ -0.61
C9orf85-204ENST00000473252 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
C9orf85-204ENST00000473252 ANKRD17O75179 2603 aaKnown RBP11.24□□□□□ -0.61
C9orf85-204ENST00000473252 RAI1Q7Z5J4 1906 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-204ENST00000473252 ZNF814B7Z6K7 855 aa11.23□□□□□ -0.61
C9orf85-204ENST00000473252 NPIPB7O75200 414 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms