RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC25A3Q00325 362 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 EEF1A1P5Q5VTE0 462 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
SKA3-205ENST00000465471 OR52E4Q8NGH9 312 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 DDIT4LQ96D03 193 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 NSL1Q96IY1 281 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 KCTD14Q9BQ13 255 aaPredicted RBP18.17■□□□□ 0.5
SKA3-205ENST00000465471 PRR14Q9BWN1 585 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 POTEKPQ9BYX7 375 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 PCDHAC1Q9H158 963 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 KCNJ16Q9NPI9 418 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 NDE1Q9NXR1 346 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 BAG5Q9UL15 447 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 TRAPPC4Q9Y296 219 aa18.17■□□□□ 0.5
SKA3-205ENST00000465471 C19orf84I3L1E1 186 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 CXCR6O00574 342 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 SMAD9O15198 467 aaKnown RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 SS18L1O75177 396 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 HSD17B1P14061 328 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 CCNA2P20248 432 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 KIR2DL2P43627 348 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 NCALDP61601 193 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 CSNK2A1P68400 391 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 OR1Q1Q15612 314 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 FBXL19-AS1Q494R0 122 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 LRRC23Q53EV4 343 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 CYBRD1Q53TN4 286 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 C16orf89Q6UX73 402 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 RBM45Q8IUH3 476 aaKnown RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 DNAJA4Q8WW22 397 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 ROBO4Q8WZ75 1007 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 GMPPAQ96IJ6 420 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 NPDC1Q9NQX5 325 aaPredicted RBP18.16■□□□□ 0.5
SKA3-205ENST00000465471 GLRX2Q9NS18 164 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 CD300AQ9UGN4 299 aa18.16■□□□□ 0.5
SKA3-205ENST00000465471 A8MVM7 634 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 SULT2B1O00204 365 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 FZD7O75084 574 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 TFPIP10646 304 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 IMPDH2P12268 514 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 IGFBP2P18065 325 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 GGT1P19440 569 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 ENPP1P22413 925 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 CALB2P22676 271 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 AGFG1P52594 562 aaKnown RBP18.15■□□□□ 0.5
SKA3-205ENST00000465471 SELENOWP63302 87 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 EGR4Q05215 589 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 BNIP2Q12982 314 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
SKA3-205ENST00000465471 ULK3Q6PHR2 472 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 FCRLAQ7L513 359 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 TRPM8Q7Z2W7 1104 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 TSPYL5Q86VY4 417 aaPredicted RBP18.15■□□□□ 0.5
SKA3-205ENST00000465471 RBM15BQ8NDT2 890 aaKnown RBP18.15■□□□□ 0.5
SKA3-205ENST00000465471 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 PROX1Q92786 737 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 SLC38A4Q969I6 547 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 STARD4Q96DR4 205 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 MCHR1Q99705 422 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 PRRG4Q9BZD6 226 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 GP6Q9HCN6 339 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 CHST11Q9NPF2 352 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 ADA2Q9NZK5 511 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 RPS6KB2Q9UBS0 482 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 SLC9A8Q9Y2E8 581 aa18.15■□□□□ 0.5
SKA3-205ENST00000465471 IGKV1D-42A0A075B6H8 117 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 CYTIPO60759 359 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 CGAP01215 116 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 KLK2P20151 261 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 ASCL1P50553 236 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 H3F3AP84243 136 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 RNPS1Q15287 305 aaKnown RBP18.14■□□□□ 0.49
SKA3-205ENST00000465471 SPATS1Q496A3 300 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 ALG10BQ5I7T1 473 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 SAMD4BQ5PRF9 694 aaKnown RBP18.14■□□□□ 0.49
SKA3-205ENST00000465471 ABLIM2Q6H8Q1 611 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 PPP4R4Q6NUP7 873 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 VWA1Q6PCB0 445 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 ZNF613Q6PF04 617 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 CBLL1Q75N03 491 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 FAM214BQ7L5A3 538 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 CARM1Q86X55 608 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 DEFB107AQ8IZN7 70 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 SLC43A2Q8N370 569 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 VANGL1Q8TAA9 524 aaPredicted RBP18.14■□□□□ 0.49
SKA3-205ENST00000465471 ABHD3Q8WU67 409 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 PIGMQ9H3S5 423 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 TMEM27Q9HBJ8 222 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 ING1Q9UK53 422 aaPredicted RBP18.14■□□□□ 0.49
SKA3-205ENST00000465471 PACSIN3Q9UKS6 424 aa18.14■□□□□ 0.49
SKA3-205ENST00000465471 A0A087WUJ7 227 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 IGHV3-15A0A0B4J1V0 119 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 B2RBV5 119 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 GSTA4O15217 222 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 LYPD3O95274 346 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 THY1P04216 161 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 PNMTP11086 282 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 TNFRSF1BP20333 461 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 COL8A1P27658 744 aa18.13■□□□□ 0.49
SKA3-205ENST00000465471 ENTPD8Q5MY95 495 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms