RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PMS2P2O95744 297 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 PLGP00747 810 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 ENPP1P22413 925 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 COL8A1P27658 744 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 GRNP28799 593 aaKnown RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 BNIP2Q12982 314 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 LRRC23Q53EV4 343 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 SP5Q6BEB4 398 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 C16orf89Q6UX73 402 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 MCEMP1Q8IX19 187 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 CNEP1R1Q8N9A8 125 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 OR6T1Q8NGN1 323 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 DNAJA4Q8WW22 397 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 PROX1Q92786 737 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 DNAJA3Q96EY1 480 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 MCHR1Q99705 422 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 POTEKPQ9BYX7 375 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 C12orf10Q9HB07 376 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 SELENONQ9NZV5 590 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 TRAPPC4Q9Y296 219 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC9A8Q9Y2E8 581 aa12.98□□□□□ -0.33
SQSTM1-205ENST00000464493 IGHV3-15A0A0B4J1V0 119 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ZC3H12DA2A288 527 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ELOA3DA6NLF2 546 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 A8MVM7 634 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 C19orf84I3L1E1 186 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 FMO6PO60774 539 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 PRKD3O94806 890 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 PNMTP11086 282 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 CALB2P22676 271 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 KIR2DL2P43627 348 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 OR2B6P58173 313 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 SELENOWP63302 87 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 TFF3Q07654 80 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 RNPS1Q15287 305 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 NPTX1Q15818 432 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ELOA3BQ3SY89 546 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ALG10BQ5I7T1 473 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 TRPM8Q7Z2W7 1104 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 RBM45Q8IUH3 476 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 DEFB107AQ8IZN7 70 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC43A2Q8N370 569 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ELOA3Q8NG57 546 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 OR4D11Q8NGI4 311 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 VANGL1Q8TAA9 524 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 RNF128Q8TEB7 428 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 STARD4Q96DR4 205 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC47A1Q96FL8 570 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 GMPPAQ96IJ6 420 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 PIGMQ9H3S5 423 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 SH3GLB1Q9Y371 365 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 ADGRG4Q8IZF6 3080 aa12.97□□□□□ -0.33
SQSTM1-205ENST00000464493 HCFC1P51610 2035 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A0B4J2E0 115 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A1B0GX12 115 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 DNPH1O43598 174 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 SS18L1O75177 396 aaPredicted RBP12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 T-ENOLP0DO92 83 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 IMPDH2P12268 514 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ASCL1P50553 236 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 CTBP2P56545 445 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 SIRPAP78324 504 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC35A1P78382 337 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ENTPD8Q5MY95 495 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 SAMD4BQ5PRF9 694 aaKnown RBP12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ZNF613Q6PF04 617 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 C6orf89Q6UWU4 347 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 LSRQ86X29 649 aaPredicted RBP12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 CARM1Q86X55 608 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 RNF148Q8N7C7 305 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ABHD3Q8WU67 409 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 LZICQ8WZA0 190 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC38A4Q969I6 547 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ZHX1-C8orf76Q96EF9 292 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 LRRC46Q96FV0 321 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 TPD52L3Q96J77 140 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 ADPRHL2Q9NX46 363 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 JKAMPQ9P055 326 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 EGFL7Q9UHF1 273 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 PACSIN3Q9UKS6 424 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 CLEC4AQ9UMR7 237 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 MPDZO75970 2070 aa12.96□□□□□ -0.33
SQSTM1-205ENST00000464493 A0A087WUJ7 227 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 NBPF19A0A087WUL8 3843 aa12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 CPSF4LA6NMK7 179 aaKnown RBP12.95□□□□□ -0.34
SQSTM1-205ENST00000464493 EEF1E1-BLOC1S5C9J1V9 151 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms