RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 OR2L5Q8NG80 312 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 OR1E3Q8WZA6 343 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 PHYHIPLQ96FC7 376 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 RPRD1AQ96P16 312 aaPredicted RBP2.91□□□□□ -1.94
CLK1-208ENST00000464454 NPAS2Q99743 824 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 KLHDC3Q9BQ90 382 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 SLC39A3Q9BRY0 314 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 CAPS2Q9BXY5 557 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 MAGT1Q9H0U3 335 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ZDHHC11Q9H8X9 412 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 ADAM22Q9P0K1 906 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 COX16Q9P0S2 106 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 BTNL2Q9UIR0 455 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 TTC21BQ7Z4L5 1316 aa2.91□□□□□ -1.94
CLK1-208ENST00000464454 HIP1O00291 1037 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SURF6O75683 361 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 TIMP1P01033 207 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 IL1BP01584 269 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 POU2F1P14859 743 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 CD1EP15812 388 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 PCMT1P22061 227 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 HMGB2P26583 209 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 GNA11P29992 359 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 CALCRP30988 508 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 RFC4P35249 363 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SSR1P43307 286 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 CCT3P49368 545 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 BIDP55957 195 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 RPS14P62263 151 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 SLC15A2Q16348 729 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 C1orf220Q5T0J3 134 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 EFL1Q7Z2Z2 1120 aaKnown RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 OR2L13Q8N349 312 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 BHLHE23Q8NDY6 225 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 OR5D13Q8NGL4 314 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 LINC01006Q8NI28 216 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 DNAJA4Q8WW22 397 aaPredicted RBP2.9□□□□□ -1.95
CLK1-208ENST00000464454 ZNF606Q8WXB4 792 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 UBE2E3Q969T4 207 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 TECTBQ96PL2 329 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 ZBTB18Q99592 522 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 PARD6BQ9BYG5 372 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SELENOIQ9C0D9 397 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 REEP4Q9H6H4 257 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SH2D2AQ9NP31 389 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 ABCB10Q9NRK6 738 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 PLSCR3Q9NRY6 295 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 NYAP2Q9P242 653 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 UGT2A1Q9Y4X1 527 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SH3TC1Q8TE82 1336 aa2.9□□□□□ -1.95
CLK1-208ENST00000464454 SYNJ2BP-COX16A0A087WUM0 186 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 A0A0G2JRQ6 117 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 DCTN6O00399 190 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 MPHOSPH10O00566 681 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 RGS16O15492 202 aaPredicted RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 ATP5LO75964 103 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 DIRAS1O95057 198 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 DRD3P35462 400 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 UGT1A5P35504 534 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 PKNOX1P55347 436 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 CSNK1G2P78368 415 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 ASPHQ12797 758 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 KLRB1Q12918 225 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 NSUN5P1Q3KNT7 163 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 CEP55Q53EZ4 464 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 C11orf71Q6IPW1 123 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 FAM220AQ7Z4H9 259 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 ERI1Q8IV48 349 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 LRRC75A-AS1Q8N1F1 130 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 FTMTQ8N4E7 242 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 CCDC71LQ8N9Z2 235 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 MFSD9Q8NBP5 474 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 TRPV1Q8NER1 839 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 OR52I1Q8NGK6 324 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 SETD7Q8WTS6 366 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 SCFD1Q8WVM8 642 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 SLC38A2Q96QD8 506 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 CLCC1Q96S66 551 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 SECISBP2Q96T21 854 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 HIST1H4GQ99525 98 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 ARHGDIGQ99819 225 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 POLR2J2Q9GZM3 115 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 POLR2J3Q9H1A7 115 aaKnown RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 ASB8Q9H765 288 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 VCPKMTQ9H867 229 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 NHEJ1Q9H9Q4 299 aaPredicted RBP2.89□□□□□ -1.95
CLK1-208ENST00000464454 FOLH1BQ9HBA9 442 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 PDFQ9HBH1 243 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 POLE4Q9NR33 117 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 TREM2Q9NZC2 230 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 THSD7BQ9C0I4 1608 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 ARHGAP23Q9P227 1491 aa2.89□□□□□ -1.95
CLK1-208ENST00000464454 KANK1Q14678 1352 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 PLEKHH1Q9ULM0 1364 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 H0Y9J4 135 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 CXCL11O14625 94 aa2.88□□□□□ -1.95
CLK1-208ENST00000464454 MED7O43513 233 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms