RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TBX19O60806 448 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CCDC22O60826 627 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 DCTN3O75935 186 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PDE5AO76074 875 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MYO1DO94832 1006 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GPR75O95800 540 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ACP2P11117 423 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TNFRSF1BP20333 461 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRPS1L1P21108 318 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 S100A3P33764 101 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 HPCAL1P37235 193 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ERFP50548 548 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NUDT2P50583 147 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GZMMP51124 257 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GPR143P51810 404 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 XKP51811 444 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NCBP2P52298 156 aaKnown RBP eCLIP3.27□□□□□ -1.896e-13■■□□□ 13
SCFD1-204ENST00000463622 ARFIP1P53367 373 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CRYBA2P53672 197 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ARSFP54793 590 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NANOS2P60321 138 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 STX1BP61266 288 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TRA2BP62995 288 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 KCNJ2P63252 427 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 HSF1Q00613 529 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MAD2L1Q13257 205 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CEACAM7Q14002 265 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CYLC2Q14093 348 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 KRT72Q14CN4 511 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 RPS6KA2Q15349 733 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NNATQ16517 81 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRICKLE4Q2TBC4 344 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 LRIF1Q5T3J3 769 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CPTPQ5TA50 214 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MFSD4BQ5TF39 518 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ABLIM2Q6H8Q1 611 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR52E8Q6IFG1 317 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRMT9Q6P2P2 845 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NPSR1Q6W5P4 371 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NCCRP1Q6ZVX7 275 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 IKBIPQ70UQ0 350 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NDUFAF7Q7L592 441 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PAGE2Q7Z2X7 111 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ANKRD37Q7Z713 158 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 DHDDSQ86SQ9 333 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 KIRREL3Q8IZU9 778 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SRFBP1Q8NEF9 429 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NFAM1Q8NET5 270 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR8J2Q8NGG1 315 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR5D16Q8NGK9 328 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CA5BP1Q8WTZ4 195 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SLC25A28Q96A46 364 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SDCCAG3Q96C92 435 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 FAM120BQ96EK7 910 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 METTL2AQ96IZ6 378 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 C18orf12Q96KH6 178 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CCDC115Q96NT0 180 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR52E6Q96RD3 313 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 KLHDC3Q9BQ90 382 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF559Q9BR84 538 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NPLQ9BXD5 320 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CADM1Q9BY67 442 aaKnown RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 MIEF1Q9NQG6 463 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NMRK1Q9NWW6 199 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TAS2R7Q9NYW3 318 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 STMN3Q9NZ72 180 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 AHSPQ9NZD4 102 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 TAGLN3Q9UI15 199 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PHF11Q9UIL8 331 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 C3orf18Q9UK00 162 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 LRP12Q9Y561 859 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 AKAP6Q13023 2319 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NCOA6Q14686 2063 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPA5A0A0B4J1W7 369 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 A0A1W2PRB8 838 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GXYLT2A0PJZ3 443 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR5H15A6NDH6 313 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRORSD1PA6NEY8 169 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 URADA6NGE7 173 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 A8MUI8 341 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 B4DXG7 233 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPA7E9PJI5 369 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRYO14603 147 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 CTNSO60931 367 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 GCM2O75603 506 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PSMG1O95456 288 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 IGKV3-11P04433 115 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 HEXAP06865 529 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPA8P0DM63 369 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 COX6A1P12074 109 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ETFAP13804 333 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 NT5EP21589 574 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 PRDX6P30041 224 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SOAT1P35610 550 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ASMTP46597 345 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 STT3AP46977 705 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 SLC7A2P52569 658 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 OR4D2P58180 307 aa3.27□□□□□ -1.89
SCFD1-204ENST00000463622 ACTN3Q08043 901 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms