RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IGHV3-15A0A0B4J1V0 119 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 PRORSD1PA6NEY8 169 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 FXYD1O00168 92 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 SERPINB7O75635 380 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 SLC1A3P43003 542 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 KCNJ5P48544 419 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 DIO1P49895 249 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 CSNK2A1P68400 391 aaPredicted RBP13.01□□□□□ -0.33
USP39-206ENST00000448971 RBBP4Q09028 425 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 GTF2IRD2BQ6EKJ0 949 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 WBP2NLQ6ICG8 309 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 FCRLAQ7L513 359 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 SERPINA11Q86U17 422 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 GTF2IRD2Q86UP8 949 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 KIF18BQ86Y91 864 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 PTOV1Q86YD1 416 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 CLIP4Q8N3C7 705 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 ABHD3Q8WU67 409 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 LRRC58Q96CX6 371 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 DDIT4LQ96D03 193 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 RCN3Q96D15 328 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 ZHX1-C8orf76Q96EF9 292 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 ALPK1Q96QP1 1244 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 SH3GL1Q99961 368 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 OR11A1Q9GZK7 315 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 OPN3Q9H1Y3 402 aaPredicted RBP13.01□□□□□ -0.33
USP39-206ENST00000448971 CLEC4MQ9H2X3 399 aaPredicted RBP13.01□□□□□ -0.33
USP39-206ENST00000448971 KAT8Q9H7Z6 458 aaKnown RBP13.01□□□□□ -0.33
USP39-206ENST00000448971 GLRX2Q9NS18 164 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 CRIM1Q9NZV1 1036 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 JKAMPQ9P055 326 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 TMED7Q9Y3B3 224 aa13.01□□□□□ -0.33
USP39-206ENST00000448971 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
USP39-206ENST00000448971 TMEM72A0PK05 275 aa13□□□□□ -0.33
USP39-206ENST00000448971 GMNCA6NCL1 334 aa13□□□□□ -0.33
USP39-206ENST00000448971 SULT2B1O00204 365 aa13□□□□□ -0.33
USP39-206ENST00000448971 MSTNO14793 375 aa13□□□□□ -0.33
USP39-206ENST00000448971 SS18L1O75177 396 aaPredicted RBP13□□□□□ -0.33
USP39-206ENST00000448971 OPN1SWP03999 348 aa13□□□□□ -0.33
USP39-206ENST00000448971 FESP07332 822 aa13□□□□□ -0.33
USP39-206ENST00000448971 PRG2P13727 222 aa13□□□□□ -0.33
USP39-206ENST00000448971 ENPP1P22413 925 aa13□□□□□ -0.33
USP39-206ENST00000448971 KIR2DL2P43627 348 aaPredicted RBP13□□□□□ -0.33
USP39-206ENST00000448971 KIR2DL3P43628 341 aa13□□□□□ -0.33
USP39-206ENST00000448971 RAC3P60763 192 aa13□□□□□ -0.33
USP39-206ENST00000448971 RNPS1Q15287 305 aaKnown RBP13□□□□□ -0.33
USP39-206ENST00000448971 ADRM1Q16186 407 aa13□□□□□ -0.33
USP39-206ENST00000448971 TMEM201Q5SNT2 666 aa13□□□□□ -0.33
USP39-206ENST00000448971 NANOGP8Q6NSW7 305 aa13□□□□□ -0.33
USP39-206ENST00000448971 DHRS4L2Q6PKH6 230 aa13□□□□□ -0.33
USP39-206ENST00000448971 NET1Q7Z628 596 aaPredicted RBP13□□□□□ -0.33
USP39-206ENST00000448971 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
USP39-206ENST00000448971 MTDHQ86UE4 582 aaKnown RBP13□□□□□ -0.33
USP39-206ENST00000448971 CDC20BQ86Y33 519 aa13□□□□□ -0.33
USP39-206ENST00000448971 SLC30A8Q8IWU4 369 aa13□□□□□ -0.33
USP39-206ENST00000448971 OR8J3Q8NGG0 315 aa13□□□□□ -0.33
USP39-206ENST00000448971 OR6K3Q8NGY3 331 aa13□□□□□ -0.33
USP39-206ENST00000448971 RP9Q8TA86 221 aaKnown RBP13□□□□□ -0.33
USP39-206ENST00000448971 MBD6Q96DN6 1003 aa13□□□□□ -0.33
USP39-206ENST00000448971 STARD4Q96DR4 205 aa13□□□□□ -0.33
USP39-206ENST00000448971 ECSITQ9BQ95 431 aa13□□□□□ -0.33
USP39-206ENST00000448971 PIF1Q9H611 641 aa13□□□□□ -0.33
USP39-206ENST00000448971 C12orf49Q9H741 205 aa13□□□□□ -0.33
USP39-206ENST00000448971 NANOGQ9H9S0 305 aa13□□□□□ -0.33
USP39-206ENST00000448971 KLHL28Q9NXS3 571 aa13□□□□□ -0.33
USP39-206ENST00000448971 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
USP39-206ENST00000448971 PLEKHA6Q9Y2H5 1048 aa13□□□□□ -0.33
USP39-206ENST00000448971 CHST2Q9Y4C5 530 aa13□□□□□ -0.33
USP39-206ENST00000448971 SNX3O60493 162 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 NPPAP01160 153 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 COX4I1P13073 169 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 DRD4P21917 467 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 DNASE1P24855 282 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 CXCR1P25024 350 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 FKBP2P26885 142 aaKnown RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 AGTR1P30556 359 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 PCGF2P35227 344 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 ACAA2P42765 397 aaKnown RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 RGS8P57771 180 aaPredicted RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 HOXC5Q00444 222 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 SORDQ00796 357 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 GUSBP1Q15486 140 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 ADGRG3Q86Y34 549 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 SMYD1Q8NB12 490 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 ANKK1Q8NFD2 765 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
USP39-206ENST00000448971 SLC26A7Q8TE54 656 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 ARL5BQ96KC2 179 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 KLHL9Q9P2J3 617 aa12.99□□□□□ -0.33
USP39-206ENST00000448971 KLHL13Q9P2N7 655 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms