RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 ACBD4Q8NC06 268 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 RNF128Q8TEB7 428 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 ROBO4Q8WZ75 1007 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 STARD4Q96DR4 205 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 GP6Q9HCN6 339 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 GALNT8Q9NY28 637 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 ELOVL5Q9NYP7 299 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 ADA2Q9NZK5 511 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 SELENONQ9NZV5 590 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 NDRG3Q9UGV2 375 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 CLEC4AQ9UMR7 237 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 TMED7Q9Y3B3 224 aa14.65□□□□□ -0.06
SF3A1-204ENST00000447376 NBPF19A0A087WUL8 3843 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 A8MXE2 369 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 GSTA4O15217 222 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 ZNF208O43345 1280 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 DNPH1O43598 174 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 GMNNO75496 209 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 MFN2O95140 757 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 CALB2P22676 271 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 DIO1P49895 249 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 FBXW10Q5XX13 1052 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 CCDC80Q76M96 950 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 TRPM8Q7Z2W7 1104 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 BTLAQ7Z6A9 289 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 PGAM4Q8N0Y7 254 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 CLIP4Q8N3C7 705 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 FAM222BQ8WU58 562 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 KCTD14Q9BQ13 255 aaPredicted RBP14.64□□□□□ -0.07
SF3A1-204ENST00000447376 SRXN1Q9BYN0 137 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 ALG2Q9H553 416 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 COQ10BQ9H8M1 238 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 EMC3Q9P0I2 261 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 ABCD2Q9UBJ2 740 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 OSGIN1Q9UJX0 560 aa14.64□□□□□ -0.07
SF3A1-204ENST00000447376 HEATR5AQ86XA9 2040 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 CENPEQ02224 2701 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 NME4O00746 187 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 CASKO14936 926 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 EIF1BO60739 113 aaKnown RBP14.63□□□□□ -0.07
SF3A1-204ENST00000447376 PMS2P2O95744 297 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 C8BP07358 591 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 POU2F1P14859 743 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 CD79BP40259 229 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 RASGEF1BQ0VAM2 473 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 BEND4Q6ZU67 534 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 RANBP3LQ86VV4 465 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-204ENST00000447376 TMEM200AQ86VY9 491 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 ADGRG3Q86Y34 549 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 NAA11Q9BSU3 229 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-204ENST00000447376 TAPBPLQ9BX59 468 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 OPN3Q9H1Y3 402 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-204ENST00000447376 TMEM181Q9P2C4 612 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 KLHL13Q9P2N7 655 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 MED12LQ86YW9 2145 aa14.63□□□□□ -0.07
SF3A1-204ENST00000447376 INTS1Q8N201 2190 aaKnown RBP14.63□□□□□ -0.07
SF3A1-204ENST00000447376 B2RBV5 119 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 FESP07332 822 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 YES1P07947 543 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 AGTR1P30556 359 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 ACAA2P42765 397 aaKnown RBP14.62□□□□□ -0.07
SF3A1-204ENST00000447376 GSK3BP49841 420 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 RGS8P57771 180 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-204ENST00000447376 OR2B6P58173 313 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 SLC35A1P78382 337 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 PLAURQ03405 335 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 DMTNQ08495 405 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 EXOC3L2Q2M3D2 409 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 SPATS1Q496A3 300 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 SAMD4BQ5PRF9 694 aaKnown RBP14.62□□□□□ -0.07
SF3A1-204ENST00000447376 SMYD1Q8NB12 490 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 PIGXQ8TBF5 258 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 ABHD3Q8WU67 409 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 LZICQ8WZA0 190 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 PROX1Q92786 737 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 ZNF524Q96C55 264 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 TRIM2Q9C040 744 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 ADAM19Q9H013 955 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 C12orf49Q9H741 205 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 MCCC2Q9HCC0 563 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 PLSCR4Q9NRQ2 329 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 TESQ9UGI8 421 aaKnown RBP14.62□□□□□ -0.07
SF3A1-204ENST00000447376 BAG5Q9UL15 447 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 TRAPPC4Q9Y296 219 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 CRYBG3Q68DQ2 2970 aa14.62□□□□□ -0.07
SF3A1-204ENST00000447376 IGHV3-15A0A0B4J1V0 119 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 TMEM72A0PK05 275 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 ELOA3DA6NLF2 546 aaPredicted RBP14.61□□□□□ -0.07
SF3A1-204ENST00000447376 A8MVM7 634 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 TPST1O60507 370 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 ADAM11O75078 769 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 GPIP06744 558 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 PRF1P14222 555 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 GTF2E2P29084 291 aaKnown RBP14.61□□□□□ -0.07
SF3A1-204ENST00000447376 KDELR2P33947 212 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 IDUAP35475 653 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 PCYT1AP49585 367 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 SLC25A3Q00325 362 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 GUSBP1Q15486 140 aa14.61□□□□□ -0.07
SF3A1-204ENST00000447376 ELOA3BQ3SY89 546 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms