RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF527Q8NB42 609 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR5M9Q8NGP3 310 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC38A5Q8WUX1 472 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 GEMIN6Q8WXD5 167 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF486Q96H40 463 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 NEDD4LQ96PU5 975 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CHRNA10Q9GZZ6 450 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR10A5Q9H207 317 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 SYNPO2LQ9H987 977 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 ADPRHL2Q9NX46 363 aa6.77□□□□□ -1.33
CDC42BPA-208ENST00000442054 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 DUXAA6NLW8 204 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF670-ZNF695F2Z2N8 137 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLPP1O14494 284 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC35E2P0CK97 266 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 AQP1P29972 269 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 DNASE1L1P49184 302 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TPTEP56180 551 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 CCBE1Q6UXH8 406 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 KIF18BQ86Y91 864 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 GHDCQ8N2G8 530 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 CNEP1R1Q8N9A8 125 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLPP5Q8NEB5 264 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR1J4Q8NGS1 313 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR9A2Q8NGT5 310 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 UCN3Q969E3 161 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 OTUB1Q96FW1 271 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 MGLLQ99685 303 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 REPIN1Q9BWE0 567 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRORYQ9H606 182 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 SERINC1Q9NRX5 453 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TUBD1Q9UJT1 453 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 PPIEQ9UNP9 301 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 PCDHGA9Q9Y5G4 932 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 DOPEY2Q9Y3R5 2298 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 C4orf51C9J302 202 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 KLF4O43474 513 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 DKK1O94907 266 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 KRT75O95678 551 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 GNLYP22749 145 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TSFMP43897 325 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TGM4P49221 684 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 MEOX1P50221 254 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 CASP9P55211 416 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDH12P55289 794 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDK6Q00534 326 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 RIN1Q13671 783 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 GCNT6Q5T4J0 391 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TNFAIP8L2Q6P589 184 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 C16orf47Q6ZP98 133 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 RBM45Q8IUH3 476 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 GRAMD2AQ8IUY3 354 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 RDH10Q8IZV5 341 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC7A5P1Q8MH63 180 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 FAM26EQ8N5C1 309 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR5AK3PQ8NH89 298 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 SETD6Q8TBK2 473 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 TM4SF18Q96CE8 201 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 N6AMT1Q9Y5N5 214 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 MYO15AQ9UKN7 3530 aa6.76□□□□□ -1.33
CDC42BPA-208ENST00000442054 IGKV1-8A0A0C4DH67 115 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 FAM90A27PA6NNH2 459 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CCRL2O00421 344 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR12D1P0DN82 309 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 DBTP11182 482 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CPEP16870 476 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 NR4A2P43354 598 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CCT3P49368 545 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ARHGDIAP52565 204 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PMP22Q01453 160 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF628Q5EBL2 1059 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PAQR6Q6TCH4 344 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 NUP43Q8NFH3 380 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 M1APQ8TC57 530 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC25A46Q96AG3 418 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC35G5Q96KT7 338 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 MED18Q9BUE0 208 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 NOX1Q9Y5S8 564 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PEX16Q9Y5Y5 336 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 EML5Q05BV3 1969 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 EFCAB10A6NFE3 127 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PGRMC2O15173 223 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLA2G10O15496 165 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 SERPINI2O75830 405 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ADAP00813 363 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 IL2RAP01589 272 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 OSMP13725 252 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 DDOSTP39656 456 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 TPD52P55327 224 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 RNF4P78317 190 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 CEBPEQ15744 281 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLEKHN1Q494U1 663 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ENTPD8Q5MY95 495 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 MEDAGQ5VYS4 303 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 ARHGAP11AQ6P4F7 1023 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 GDPGP1Q6ZNW5 385 aa6.75□□□□□ -1.33
CDC42BPA-208ENST00000442054 KRT73Q86Y46 540 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms