RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CDV3Q9UKY7 258 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 MKL2Q9ULH7 1088 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 EDARQ9UNE0 448 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ICKQ9UPZ9 632 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 IGKV1-8A0A0C4DH67 115 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CENPVL1A0A0U1RR11 272 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CDHR4A6H8M9 788 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 B4DGG1 531 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PEX12O00623 359 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRAPPC2P0DI81 140 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRAPPC2BP0DI82 140 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CPMP14384 443 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC6A1P30531 599 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 NKPD1Q17RQ9 610 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 B3GNTL1Q67FW5 361 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF770Q6IQ21 691 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ARMC6Q6NXE6 501 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 LRRC56Q8IYG6 542 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CASTOR1Q8WTX7 329 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PTCHD1Q96NR3 888 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF471Q9BX82 626 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 BTBD1Q9H0C5 482 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PLEKHA6Q9Y2H5 1048 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 COLEC10Q9Y6Z7 277 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 A0A1W2PPV9 198 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 LINC01387J3KSC0 135 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 SGK494L7N484 410 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 FARS2O95363 451 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 MAOBP27338 520 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 SNRPGP62308 76 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 RPS21P63220 83 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 EEF1A2Q05639 463 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF33BQ06732 778 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ST3GAL3Q11203 375 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 CAMK2DQ13557 499 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 TAF13Q15543 124 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ITPRIPL2Q3MIP1 535 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM69AQ5T7M9 428 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 GPR139Q6DWJ6 353 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF322Q6U7Q0 402 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 DUSP19Q8WTR2 217 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 SMPDL3BQ92485 455 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 FCRL1Q96LA6 429 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 ULBP3Q9BZM4 244 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 HPF1Q9NWY4 346 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 TAS2R10Q9NYW0 307 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 IKZF2Q9UKS7 526 aa9.19□□□□□ -0.94
CDC42SE1-202ENST00000439374 PLXNA4Q9HCM2 1894 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 EMC8O43402 210 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CEACAM5P06731 702 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CXCL2P19875 107 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 REEP5Q00765 189 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 RAB40BQ12829 278 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRAM2Q15035 370 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 UNQ6126/PRO20091Q6UXV3 157 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CDK20Q8IZL9 346 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR2L5Q8NG80 312 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR7G2Q8NG99 324 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 RFKQ969G6 155 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 LRRC46Q96FV0 321 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR2M4Q96R27 311 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 MYADMQ96S97 322 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 FAM83CQ9BQN1 747 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 POLDIP3Q9BY77 421 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 NOX3Q9HBY0 568 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRIM36Q9NQ86 728 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CLDND1Q9NY35 253 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 MAFFQ9ULX9 164 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ERVK-19Q9WJR5 959 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TRBV2A0A0J9YWF9 115 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ECDO95905 644 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 IGFBP4P22692 258 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 GUCA2AQ02747 115 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CRMP1Q14194 572 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 VASNQ6EMK4 673 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 RNF165Q6ZSG1 346 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SSX6Q7RTT6 188 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 CAMKMTQ7Z624 323 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 UBE2Q1Q7Z7E8 422 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ASPGQ86U10 573 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 TMEM185AQ8NFB2 350 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR4K14Q8NGD5 310 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 OR5M3Q8NGP4 307 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SUN3Q8TAQ9 357 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 FANK1Q8TC84 345 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC35A4Q96G79 324 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 SLC41A3Q96GZ6 507 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 LMF1Q96S06 567 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 C12orf57Q99622 126 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 NDC1Q9BTX1 674 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 ZNF416Q9BWM5 594 aa9.18□□□□□ -0.94
CDC42SE1-202ENST00000439374 PARP12Q9H0J9 701 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms