RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GNB5O14775 395 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 TRIM3O75382 744 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-206ENST00000431390 WDPCPO95876 746 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 MAKP20794 623 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 PTNP21246 168 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 MASP1P48740 699 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 CRYZQ08257 329 aaKnown RBP16.53■□□□□ 0.24
HMGN1-206ENST00000431390 MFAP5Q13361 173 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 INPP5JQ15735 1006 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-206ENST00000431390 LINC00696Q6ZRV3 163 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 OR1J4Q8NGS1 313 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 C1GALT1C1Q96EU7 318 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 MRGPRX4Q96LA9 322 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 APOL4Q9BPW4 351 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 UBAP1Q9NZ09 502 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 FBXL2Q9UKC9 423 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 HSPE1-MOB4S4R3N1 261 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 A0A087WZY1 265 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 TMED7-TICAM2A0A0A6YYA0 188 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 ENO4A6NNW6 628 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 H3BN98 237 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 CDC42EP2O14613 210 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 NEURL1O76050 574 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 CNR1P21554 472 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 GGT2P36268 569 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 APOBEC1P41238 236 aaKnown RBP16.52■□□□□ 0.24
HMGN1-206ENST00000431390 MAP2K6P52564 334 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 TPD52P55327 224 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-206ENST00000431390 RAPSNQ13702 412 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 PTGES3Q15185 160 aaKnown RBP16.52■□□□□ 0.24
HMGN1-206ENST00000431390 PLPPR5Q32ZL2 321 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 LINC00303Q3SY05 128 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 TIGD3Q6B0B8 471 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 C5orf46Q6UWT4 87 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 ARSKQ6UWY0 536 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 MEX3DQ86XN8 651 aaKnown RBP16.52■□□□□ 0.24
HMGN1-206ENST00000431390 ADGRG3Q86Y34 549 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 SGTBQ96EQ0 304 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF552Q9H707 407 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-206ENST00000431390 VDAC3Q9Y277 283 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 TMED7Q9Y3B3 224 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 MPDZO75970 2070 aa16.52■□□□□ 0.24
HMGN1-206ENST00000431390 UNC119BA6NIH7 251 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 A6NL46 340 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 EFCAB9A8MZ26 197 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SOX14O95416 240 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 NUP107P57740 925 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 EGR4Q05215 589 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 OR1C1Q15619 314 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 UGT2A3Q6UWM9 527 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 ZNF620Q6ZNG0 422 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 THAP5Q7Z6K1 395 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 KIF18BQ86Y91 864 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SIGLEC12Q96PQ1 595 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 PNPLA3Q9NST1 481 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 IL20Q9NYY1 176 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 OR5H15A6NDH6 313 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SUSD5O60279 629 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SLC25A12O75746 678 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 CBR3O75828 277 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SAGP10523 405 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-206ENST00000431390 POU1F1P28069 291 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 ADH6P28332 368 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 EIF1P41567 113 aaKnown RBP16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SLC9A3P48764 834 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 DSCR4P56555 118 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-206ENST00000431390 FOXF1Q12946 379 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 DEFB109BQ30KR1 87 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 SPINK14Q6IE38 97 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 RPL13AP3Q6NVV1 102 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 P3H2Q8IVL5 708 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 TEX47Q8TBZ9 253 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 STK35Q8TDR2 534 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 LIPHQ8WWY8 451 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 HAS2Q92819 552 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 OSTF1Q92882 214 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 ZBTB8AQ96BR9 441 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 KCNMB2Q9Y691 235 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 CDH10Q9Y6N8 788 aa16.51■□□□□ 0.23
HMGN1-206ENST00000431390 TMEM72A0PK05 275 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 A8MVM7 634 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 G3V3Y1 287 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 CEACAM4O75871 244 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 F10P00742 488 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 DNASE1L1P49184 302 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 CCL11P51671 97 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 ISL1P61371 349 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 SLX4IPQ5VYV7 408 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 Q6ZPB1 254 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-206ENST00000431390 DEPDC4Q8N2C3 294 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-206ENST00000431390 SLC43A2Q8N370 569 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 EXTL1Q92935 676 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 DTNBP1Q96EV8 351 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 EGLN3Q9H6Z9 239 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 SLC25A19Q9HC21 320 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 PLA2G3Q9NZ20 509 aa16.5■□□□□ 0.23
HMGN1-206ENST00000431390 CHRNA9Q9UGM1 479 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms