RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 OR7C1O76099 320 aaPredicted RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 PRKAR1BP31321 381 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 KEAP1Q14145 624 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 ZNF585AQ6P3V2 769 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 PIWIL3Q7Z3Z3 882 aaKnown RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 OR14A16Q8NHC5 309 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 ZNF578Q96N58 590 aaPredicted RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 QRSL1Q9H0R6 528 aaKnown RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 ARNT2Q9HBZ2 717 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 RRP8O43159 456 aaKnown RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 MTHFD2P13995 350 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 GPX3P22352 226 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 SLC7A9P82251 487 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 MRPS21P82921 87 aaKnown RBP14.36□□□□□ -0.11
PTPRF-206ENST00000429895 TNK1Q13470 666 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 TMEM163Q8TC26 289 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 NMNAT2Q9BZQ4 307 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 NME7Q9Y5B8 376 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 WIF1Q9Y5W5 379 aa14.36□□□□□ -0.11
PTPRF-206ENST00000429895 PHRF1Q9P1Y6 1649 aaKnown RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ZNF593O00488 134 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 SLC5A2P31639 672 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 VEGFCP49767 419 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 VEZF1Q14119 521 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 SERPINA11Q86U17 422 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ZFAND1Q8TCF1 268 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 BMP2P12643 396 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ICAM2P13598 275 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 HOXD9P28356 352 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 MTCP1P56278 107 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 KCNJ10P78508 379 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 PGGHGQ32M88 737 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 AARDQ4LEZ3 155 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 NCCRP1Q6ZVX7 275 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 OR5K2Q8NHB8 316 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 EDAQ92838 391 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 FOXRED1Q96CU9 486 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 BIRC8Q96P09 236 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 GFOD1Q9NXC2 390 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 NXPH3O95157 252 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 EIF4EP06730 217 aaKnown RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 AOAHP28039 575 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 RPL35P42766 123 aaKnown RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 F2RL1P55085 397 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 RAB38P57729 211 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ESPNLQ6ZVH7 1005 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 SLC7A13Q8TCU3 470 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 BRIX1Q8TDN6 353 aaKnown RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 EGLN2Q96KS0 407 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 GNG12Q9UBI6 72 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 INTS6Q9UL03 887 aaKnown RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 BLACEA4D250 179 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 C1orf196B1AJZ1 125 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ZNF264O43296 627 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 FGF4P08620 206 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TACR3P29371 465 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ERVFC1P60507 584 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 MEF2DQ14814 521 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 KHDC1LQ5JSQ8 128 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TMPRSS7Q7RTY8 843 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 SUMF2Q8NBJ7 301 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 OR5D18Q8NGL1 313 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 FIZ1Q96SL8 496 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 PITHD1Q9GZP4 211 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-206ENST00000429895 ZNF286AQ9HBT8 521 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TMEM181Q9P2C4 612 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 CCL26Q9Y258 94 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 B4GAT1O43505 415 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 HES1Q14469 280 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 SCCPDHQ8NBX0 429 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 TMEM185AQ8NFB2 350 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 MFFQ9GZY8 342 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 GNB4Q9HAV0 340 aa14.35□□□□□ -0.11
PTPRF-206ENST00000429895 PRKRAO75569 313 aaKnown RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 CDK1P06493 297 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 RAB40BQ12829 278 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 TRIM61Q5EBN2 209 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 CYP4V2Q6ZWL3 525 aaPredicted RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 RTP4Q96DX8 246 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 SPEF2Q9C093 1822 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 OPRL1P41146 370 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 TRA2BP62995 288 aaKnown RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 CLEC14AQ86T13 490 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 C3orf30Q96M34 536 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 ATG4BQ9Y4P1 393 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 RRADP55042 308 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 LTB4RQ15722 352 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 PDLIM3Q53GG5 364 aaPredicted RBP14.34□□□□□ -0.11
PTPRF-206ENST00000429895 RDH10Q8IZV5 341 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 KCNJ16Q9NPI9 418 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 STEAP1Q9UHE8 339 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 C17orf113A0A1B0GUU1 675 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 A6NHS1 94 aa14.34□□□□□ -0.11
PTPRF-206ENST00000429895 TK1P04183 234 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms