RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 TEAD1P28347 426 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 FNTBP49356 437 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 HCCSP53701 268 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF234Q14588 700 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 SLC36A2Q495M3 483 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TMED4Q7Z7H5 227 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 OR6V1Q8N148 313 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 METTL27Q8N6F8 245 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 OR4K14Q8NGD5 310 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 DIO2Q92813 273 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ORAI1Q96D31 301 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 RBM18Q96H35 190 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 HEXA-AS1Q9H8Q6 139 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 URADA6NGE7 173 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ANXA2P2A6NMY6 339 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 VEGFDO43915 354 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TBX19O60806 448 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ANXA2P07355 339 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TYRP1P17643 537 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 CEBPBP17676 345 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ATF1P18846 271 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 AK4P27144 223 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 RAD52P43351 418 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 GK2Q14410 553 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 LRRC37A5PQ49AS3 106 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TMEM215Q68D42 235 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 NR2C2APQ86WQ0 139 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 SFXN5Q8TD22 340 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 BRIX1Q8TDN6 353 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TSEN15Q8WW01 171 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ELP4Q96EB1 424 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF559Q9BR84 538 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 LGR4Q9BXB1 951 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 SIDT1Q9NXL6 827 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 SCN2AQ99250 2005 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 A0A1W2PS29 197 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TRAPPC13A5PLN9 417 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 MEIS3P1A6NDR6 274 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 KHNYNO15037 678 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 KLHL18O94889 574 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 SPDEFO95238 335 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 S100A11P31949 105 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 BTCP35070 178 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 CAPZA2P47755 286 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 PDX1P52945 283 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ERVFC1P60507 584 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TRA2BP62995 288 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 EXOSC7Q15024 291 aaKnown RBP9.49□□□□□ -0.89
CTCFL-206ENST00000426658 PON3Q15166 354 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF542PQ5EBM4 170 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 DEFB123Q8N688 67 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF676Q8N7Q3 588 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 FBXW5Q969U6 566 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 TEAD3Q99594 435 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ACTRT3Q9BYD9 372 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 EPHX3Q9H6B9 360 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 HRASLSQ9HDD0 168 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 ADAM29Q9UKF5 820 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 COLEC10Q9Y6Z7 277 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 DOCK6Q96HP0 2047 aa9.49□□□□□ -0.89
CTCFL-206ENST00000426658 GREM1O60565 184 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 ATP1B1P05026 303 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 GAAP10253 952 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 CTSAP10619 480 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 HOXB3P14651 431 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 CD53P19397 219 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 EFNB1P98172 346 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 PUS10Q3MIT2 529 aaKnown RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 UBE2NLQ5JXB2 153 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 COMMD2Q86X83 199 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 NRROSQ86YC3 692 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 RASGRP3Q8IV61 690 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 C17orf47Q8NEP4 570 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 OR4D9Q8NGE8 314 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 OR52I2Q8NH67 350 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF563Q8TA94 476 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 SMIM4Q8WVI0 70 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 TMEM239Q8WW34 195 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 MS4A7Q9GZW8 240 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 MTHFD2LQ9H903 347 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 STARD5Q9NSY2 213 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 MLXQ9UH92 298 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 HOXD4P09016 255 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 SBK2P0C263 348 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 ZNF888P0CJ79 500 aaPredicted RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 ANXA7P20073 488 aaKnown RBP9.48□□□□□ -0.89
CTCFL-206ENST00000426658 MNDAP41218 407 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 CDK3Q00526 305 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 PDGFRLQ15198 375 aa9.48□□□□□ -0.89
CTCFL-206ENST00000426658 DEFB110Q30KQ9 67 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms