RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DNAJA4Q8WW22 397 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 PIGMQ9H3S5 423 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 JKAMPQ9P055 326 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 TMEM181Q9P2C4 612 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 BAG5Q9UL15 447 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 PKDREJQ9NTG1 2253 aa17.75■□□□□ 0.43
PDLIM2-207ENST00000409417 A0A1B0GWA3 101 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 C19orf84I3L1E1 186 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 M0R3H8 397 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 TPST2O60704 377 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 PMS2P2O95744 297 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 PLGP00747 810 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 ENPP1P22413 925 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 ASCL1P50553 236 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 RNPS1Q15287 305 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 FBXL19-AS1Q494R0 122 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 C6orf89Q6UWU4 347 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 FAM214BQ7L5A3 538 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC43A2Q8N370 569 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 CNEP1R1Q8N9A8 125 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 PROX1Q92786 737 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 STARD4Q96DR4 205 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 KCTD14Q9BQ13 255 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 PRR14Q9BWN1 585 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 POTEKPQ9BYX7 375 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 C12orf10Q9HB07 376 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 TMEM27Q9HBJ8 222 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 NPDC1Q9NQX5 325 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 NDE1Q9NXR1 346 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 PACSIN3Q9UKS6 424 aa17.74■□□□□ 0.43
PDLIM2-207ENST00000409417 CRYBG3Q68DQ2 2970 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ZC3H12DA2A288 527 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 A8MVM7 634 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 EEF1E1-BLOC1S5C9J1V9 151 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 EEF1E1O43324 174 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 DNPH1O43598 174 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 PNMTP11086 282 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 OR1Q1Q15612 314 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 CYBRD1Q53TN4 286 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 HIST2H2BCQ6DN03 193 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ULK3Q6PHR2 472 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 MCEMP1Q8IX19 187 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 PGAM4Q8N0Y7 254 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ACBD4Q8NC06 268 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 OR6T1Q8NGN1 323 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ABHD3Q8WU67 409 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 NSL1Q96IY1 281 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 GP6Q9HCN6 339 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ADA2Q9NZK5 511 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC9A8Q9Y2E8 581 aa17.73■□□□□ 0.43
PDLIM2-207ENST00000409417 ELOA3DA6NLF2 546 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 TMEM229AB2RXF0 380 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 CXCR6O00574 342 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 GSTA4O15217 222 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 SS18L1O75177 396 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 PRKD3O94806 890 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 BNIP2Q12982 314 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 ELOA3BQ3SY89 546 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 LRRC23Q53EV4 343 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 ALG10BQ5I7T1 473 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 BTLAQ7Z6A9 289 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 ELOA3Q8NG57 546 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 ZHX1-C8orf76Q96EF9 292 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 LRRC46Q96FV0 321 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 MCHR1Q99705 422 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 SELENONQ9NZV5 590 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 CLEC4AQ9UMR7 237 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 EMC9Q9Y3B6 208 aa17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 ANKHD1Q8IWZ3 2542 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-207ENST00000409417 A0A0B4J2E0 115 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 A0A1B0GX12 115 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SMAD9O15198 467 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 NPIPB7O75200 414 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 CTBP2P56545 445 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SIRPAP78324 504 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC35A1P78382 337 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC25A3Q00325 362 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 NPTX1Q15818 432 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SWT1Q5T5J6 900 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 VWA1Q6PCB0 445 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 ZNF613Q6PF04 617 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 C16orf89Q6UX73 402 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 OR4D11Q8NGI4 311 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 STK35Q8TDR2 534 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC38A4Q969I6 547 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SLC47A1Q96FL8 570 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SPOCK3Q9BQ16 436 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 ENKD1Q9H0I2 346 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 PCDHAC1Q9H158 963 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 KLHL9Q9P2J3 617 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 FOXD3Q9UJU5 478 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 SH3GLB1Q9Y371 365 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 CELSR2Q9HCU4 2923 aa17.71■□□□□ 0.43
PDLIM2-207ENST00000409417 IGHV3-15A0A0B4J1V0 119 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 MSTNO14793 375 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 EIF1BO60739 113 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 CYTIPO60759 359 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 CGAP01215 116 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 IMPDH2P12268 514 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 IGFBP2P18065 325 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms