RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ANKRD9Q96BM1 317 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 ZG16BQ96DA0 208 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 KCTD7Q96MP8 289 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 DGAT2Q96PD7 388 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 ZPBPQ9BS86 351 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 SPRTNQ9H040 489 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 Q9N2J8 555 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 CNIH4Q9P003 139 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 RPS6KB2Q9UBS0 482 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 PRODH2Q9UF12 536 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-203ENST00000407082 SPTBP11277 2137 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 LOC101059948A0A1B0GTJ6 334 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 IQCMA0A1B0GVH7 501 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF860A6NHJ4 632 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 K7EM74 188 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CHP2O43745 196 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 DYRK3O43781 588 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 PPM1BO75688 479 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 GPX5O75715 221 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 IFNGP01579 166 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 TCN2P20062 427 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 FUT4P22083 530 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CFL1P23528 166 aaKnown RBP11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 GABRA5P31644 462 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CRYBB2P43320 205 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF136P52737 540 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CTBP2P56545 445 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 HSD17B7P56937 341 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 MGAT2Q10469 447 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 SLC13A2Q13183 592 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 AGAP7PQ5VUJ5 663 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 AADACL4Q5VUY2 407 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 PWWP2BQ6NUJ5 590 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 ASB18Q6ZVZ8 466 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 OLIG3Q7RTU3 272 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 SETD6Q8TBK2 473 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 RIT1Q92963 219 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 MRPL48Q96GC5 212 aaKnown RBP11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 GPA33Q99795 319 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 SLC30A2Q9BRI3 323 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 DDA1Q9BW61 102 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 HOXD1Q9GZZ0 328 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 PRTFDC1Q9NRG1 225 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 ASB6Q9NWX5 421 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 MRTO4Q9UKD2 239 aaKnown RBP11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CAB39Q9Y376 341 aaPredicted RBP11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 CHST2Q9Y4C5 530 aa11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
SMARCB1-203ENST00000407082 SLC22A31A6NKX4 558 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 H0YIG0 161 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 H3BMH7 237 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SGK494L7N484 410 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 MAGEB3O15480 346 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF749O43361 778 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 FRS3O43559 492 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 RDH16O75452 317 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SCRG1O75711 98 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 HLA-DPB1P04440 258 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 RNF224P0DH78 156 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 IFI30P13284 250 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 HK1P19367 917 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 CD53P19397 219 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC9A3P48764 834 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ETV1P50549 477 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 GPR143P51810 404 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 IGLV3-21P80748 117 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 POU4F2Q12837 409 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 PRAMEF17Q5VTA0 474 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 CXXC5Q7LFL8 322 aaKnown RBP11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 HMGN2P46Q86SG4 172 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 CCDC190Q86UF4 302 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 NLGN4YQ8NFZ3 816 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 OR7G1Q8NGA0 311 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 OR52R1Q8NGF1 315 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC2A12Q8TD20 617 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 TMEM255BQ8WV15 326 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 TMCO6Q96DC7 493 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 RNF31Q96EP0 1072 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ALOXE3Q9BYJ1 711 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 PLA2G12AQ9BZM1 189 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ULBP3Q9BZM4 244 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SLC7A5P2Q9GIP4 190 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 NDEL1Q9GZM8 345 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ANKRA2Q9H9E1 313 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 FOLH1BQ9HBA9 442 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 SMURF1Q9HCE7 757 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 TAS2R16Q9NYV7 291 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 TNFRSF10DQ9UBN6 386 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
SMARCB1-203ENST00000407082 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms