RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 MUC20Q8N307 709 aaPredicted RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 PAQR8Q8TEZ7 354 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 XAGE5Q8WWM1 108 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 JAM3Q9BX67 310 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 SEC11CQ9BY50 192 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 CERS4Q9HA82 394 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 HINT3Q9NQE9 182 aaKnown RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 ZDHHC3Q9NYG2 299 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 TRPC4Q9UBN4 977 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 MYO10Q9HD67 2058 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 TRBV5-4A0A0C4DH59 114 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 ACOT7O00154 380 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 OIP5O43482 229 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 FADS1O60427 444 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 PRKRAO75569 313 aaKnown RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 OR2F2O95006 317 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 SLC2A10O95528 541 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 ACTR1AP61163 376 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
CYLD-202ENST00000398568 OR2F1Q13607 317 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 UPP1Q16831 310 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 IER5LQ5T953 404 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 PXKQ7Z7A4 578 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 TEX19Q8NA77 164 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 OR6T1Q8NGN1 323 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 OR13C5Q8NGS8 318 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 GHSRQ92847 366 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 UCK1Q9HA47 277 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 MAN2C1Q9NTJ4 1040 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 TREM2Q9NZC2 230 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 ASF1AQ9Y294 204 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 PIKFYVEQ9Y2I7 2098 aa13.92□□□□□ -0.18
CYLD-202ENST00000398568 KIAA0355O15063 1070 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 GPR37O15354 613 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 TGFB1P01137 390 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 KLK1P06870 262 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 MYOGP15173 224 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 PON3Q15166 354 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 ZNF697Q5TEC3 545 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 C6orf120Q7Z4R8 191 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 APCDD1Q8J025 514 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 NEURL3Q96EH8 262 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 SPSB2Q99619 263 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 FAM117AQ9C073 453 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 SLC6A16Q9GZN6 736 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 IL20RAQ9UHF4 553 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 COLCA2A8K830 154 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 SYT5O00445 386 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 ZNF749O43361 778 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 FGBP02675 491 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 CERS1P27544 350 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 PYCR1P32322 319 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 MECP2P51608 486 aaKnown RBP13.91□□□□□ -0.18
CYLD-202ENST00000398568 NRG3P56975 720 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 FZD5Q13467 585 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 PDE7AQ13946 482 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 C1orf53Q5VUE5 145 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 ZFPM2Q8WW38 1151 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 CPNE2Q96FN4 548 aaPredicted RBP13.91□□□□□ -0.18
CYLD-202ENST00000398568 C4orf36Q96KX1 117 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 TMEM231Q9H6L2 316 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 MYNNQ9NPC7 610 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 CSNK1DP48730 415 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 SEMG2Q02383 582 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 RBM39Q14498 530 aaKnown RBP13.91□□□□□ -0.18
CYLD-202ENST00000398568 SHHQ15465 462 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 FAM71E1Q6IPT2 247 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 SERPINA13PQ6UXR4 307 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 HMGN2P46Q86SG4 172 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 TMPRSS11BQ86T26 416 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 TMEM200AQ86VY9 491 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 VRK3Q8IV63 474 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 C15orf54Q8N8G6 183 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 C17orf47Q8NEP4 570 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 OR2T33Q8NG76 320 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 P2RX2Q9UBL9 471 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
CYLD-202ENST00000398568 COL6A3P12111 3177 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 CLN5O75503 358 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 CD2P06729 351 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 ZNF234Q14588 700 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 NUDT18Q6ZVK8 323 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 SLC36A1Q7Z2H8 476 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 SPRED2Q7Z698 418 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 ZNF614Q8N883 585 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 CAMK1GQ96NX5 476 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 ASH2LQ9UBL3 628 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.9□□□□□ -0.18
CYLD-202ENST00000398568 NUDT19A8MXV4 375 aa13.9□□□□□ -0.18
CYLD-202ENST00000398568 ANXA2P07355 339 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms