RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TNFSF13O75888 250 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 PLGP00747 810 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 CRHP06850 196 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 CLK1P49759 484 aaKnown RBP18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 CSNK2A1P68400 391 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 BNIP2Q12982 314 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 FCRLAQ7L513 359 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 OR6T1Q8NGN1 323 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 RNF128Q8TEB7 428 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 PROX1Q92786 737 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 BAG5Q9UL15 447 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 CLEC4AQ9UMR7 237 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 ADGRG4Q8IZF6 3080 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 MPDZO75970 2070 aa18.95■□□□□ 0.62
TSPAN4-206ENST00000397408 CXCR6O00574 342 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 ENPP1P22413 925 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 MNAT1P51948 309 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 TFF3Q07654 80 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 OR1Q1Q15612 314 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 NPTX1Q15818 432 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 CYBRD1Q53TN4 286 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 C16orf89Q6UX73 402 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 MCEMP1Q8IX19 187 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 RNF148Q8N7C7 305 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 OR4D11Q8NGI4 311 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 ABHD3Q8WU67 409 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 NSL1Q96IY1 281 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 MCHR1Q99705 422 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 TMEM27Q9HBJ8 222 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 CHST11Q9NPF2 352 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 NDE1Q9NXR1 346 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 PACSIN3Q9UKS6 424 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 SLC9A8Q9Y2E8 581 aa18.94■□□□□ 0.62
TSPAN4-206ENST00000397408 ELOA3DA6NLF2 546 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 TMEM229AB2RXF0 380 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 SMAD9O15198 467 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 PMS2P2O95744 297 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 KLK2P20151 261 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 KIR2DL2P43627 348 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 ASCL1P50553 236 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 GUSBP1Q15486 140 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 ELOA3BQ3SY89 546 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 ALG10BQ5I7T1 473 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 VWA1Q6PCB0 445 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 C6orf89Q6UWU4 347 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 RBM45Q8IUH3 476 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 ELOA3Q8NG57 546 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 RNF217Q8TC41 542 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 DNAJA4Q8WW22 397 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 GMPPAQ96IJ6 420 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 NPDC1Q9NQX5 325 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 SH3GLB1Q9Y371 365 aa18.93■□□□□ 0.62
TSPAN4-206ENST00000397408 A0A0B4J2E0 115 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 A0A1B0GX12 115 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 A8MVM7 634 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 FMO6PO60774 539 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 SS18L1O75177 396 aaPredicted RBP18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 TNFRSF1BP20333 461 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 OR2B6P58173 313 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 EEF1A1P5Q5VTE0 462 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 ULK3Q6PHR2 472 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 CARM1Q86X55 608 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 DEFB107AQ8IZN7 70 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 ZHX1-C8orf76Q96EF9 292 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 TPD52L3Q96J77 140 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 PIGMQ9H3S5 423 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 C12orf10Q9HB07 376 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 GLRX2Q9NS18 164 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 SELENONQ9NZV5 590 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 EMC9Q9Y3B6 208 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 HCFC1P51610 2035 aa18.92■□□□□ 0.62
TSPAN4-206ENST00000397408 CPSF4LA6NMK7 179 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 IMPDH2P12268 514 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 NCK1P16333 377 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 CALB2P22676 271 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 IDUAP35475 653 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 CTBP2P56545 445 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 RNPS1Q15287 305 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 GTF2IRD2BQ6EKJ0 949 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 FAM214BQ7L5A3 538 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 TRPM8Q7Z2W7 1104 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 LUZP2Q86TE4 346 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 GTF2IRD2Q86UP8 949 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 SLC43A2Q8N370 569 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 STARD4Q96DR4 205 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 SLC47A1Q96FL8 570 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 POTEKPQ9BYX7 375 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 EGFL7Q9UHF1 273 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 TRAPPC4Q9Y296 219 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 B2RBV5 119 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 DNPH1O43598 174 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 NPIPB7O75200 414 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 SMNDC1O75940 238 aaKnown RBP eCLIP18.91■□□□□ 0.623e-7■■□□□ 12.7
TSPAN4-206ENST00000397408 PNMTP11086 282 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 GGT1P19440 569 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 ENTPD8Q5MY95 495 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 SAMD4BQ5PRF9 694 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 C1orf140Q5VVS0 124 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 SP5Q6BEB4 398 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 ZNF613Q6PF04 617 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms