RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 EIF1P41567 113 aaKnown RBP12.73□□□□□ -0.37
GAPDH-203ENST00000396858 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PPIAP62937 165 aaKnown RBP12.73□□□□□ -0.37
GAPDH-203ENST00000396858 EGR4Q05215 589 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 SELENBP1Q13228 472 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 RNFT1Q5M7Z0 435 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 SLC6A19Q695T7 634 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PPP4R4Q6NUP7 873 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 C19orf48Q6RUI8 117 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 RRM2BQ7LG56 351 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PRICKLE2Q7Z3G6 844 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 ZER1Q7Z7L7 766 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 ADGRG3Q86Y34 549 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 FAM109AQ8N4B1 249 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PACRGLQ8N7B6 248 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 OR13C2Q8NGS9 318 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 KTI12Q96EK9 354 aaPredicted RBP12.73□□□□□ -0.37
GAPDH-203ENST00000396858 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 TMEM43Q9BTV4 400 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 TSPAN10Q9H1Z9 355 aaPredicted RBP12.73□□□□□ -0.37
GAPDH-203ENST00000396858 KRT84Q9NSB2 600 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 MGAT4BQ9UQ53 548 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 PCDHGB6Q9Y5F9 930 aa12.73□□□□□ -0.37
GAPDH-203ENST00000396858 CDC42EP2O14613 210 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
GAPDH-203ENST00000396858 KLF4O43474 513 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 EFNA2O43921 213 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 AHSA1O95433 338 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 OPN1LWP04000 364 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 HPNP05981 417 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 ANXA8P13928 327 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 FPR3P25089 353 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SFTPDP35247 375 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 IFNGR2P38484 337 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 RPS5P46782 204 aaKnown RBP12.72□□□□□ -0.37
GAPDH-203ENST00000396858 CTBP2P56545 445 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 C19orf57Q0VDD7 668 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 HYAL4Q2M3T9 481 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SYT14P1Q58G82 188 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 KDM4DQ6B0I6 523 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 KLHL17Q6TDP4 642 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 LINC00471Q8N535 108 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 BPIFA2Q96DR5 249 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SGTBQ96EQ0 304 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 PIGQQ9BRB3 760 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 PTDSS2Q9BVG9 487 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 DGCR6LQ9BY27 220 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SLC19A3Q9BZV2 496 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 PAPOLBQ9NRJ5 636 aaKnown RBP12.72□□□□□ -0.37
GAPDH-203ENST00000396858 TMEM5Q9Y2B1 443 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SLC6A5Q9Y345 797 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 SPIN1Q9Y657 262 aaPredicted RBP12.72□□□□□ -0.37
GAPDH-203ENST00000396858 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
GAPDH-203ENST00000396858 TRAV36DV7A0A075B6V5 113 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 A8MVM7 634 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 EFCAB9A8MZ26 197 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 DLGAP1O14490 977 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 NPIPB7O75200 414 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 OR7A10O76100 309 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 SNAP29O95721 258 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 CH25HO95992 272 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-203ENST00000396858 TFPIP10646 304 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 ADH6P28332 368 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 GSSP48637 474 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 PRKCDQ05655 676 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.71□□□□□ -0.376e-10■□□□□ 9.9
GAPDH-203ENST00000396858 ZIK1Q3SY52 487 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-203ENST00000396858 NADK2Q4G0N4 442 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 GXYLT1Q4G148 440 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 C1orf140Q5VVS0 124 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 C1orf94Q6P1W5 598 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 TRILQ7L0X0 811 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 RNF113BQ8IZP6 322 aaKnown RBP12.71□□□□□ -0.37
GAPDH-203ENST00000396858 C10orf53Q8N6V4 93 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 FANK1Q8TC84 345 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 STK35Q8TDR2 534 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 SLC25A43Q8WUT9 341 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-203ENST00000396858 DDIT4LQ96D03 193 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 ARL5BQ96KC2 179 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 MBOAT4Q96T53 435 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 UCK2Q9BZX2 261 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 TOR3AQ9H497 397 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 C8orf4Q9NR00 106 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 SERINC1Q9NRX5 453 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
GAPDH-203ENST00000396858 B3GNT3Q9Y2A9 372 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 ORC6Q9Y5N6 252 aa12.71□□□□□ -0.37
GAPDH-203ENST00000396858 TRAV27A0A087WT01 109 aa12.7□□□□□ -0.38
GAPDH-203ENST00000396858 A0A1W2PNR3 127 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms