RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 HCCSP53701 268 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SIRPAP78324 504 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 CAMK2DQ13557 499 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 TMUB2Q71RG4 321 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SLC46A2Q9BY10 475 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 C19orf12Q9NSK7 152 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 PPP4R1LQ9P1A2 415 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 TRAPPC4Q9Y296 219 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ADAMTS7Q9UKP4 1686 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 PEX12O00623 359 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ADAM10O14672 748 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF16P17020 682 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 CRABP1P29762 137 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SEC61A1P61619 476 aaKnown RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SIM1P81133 766 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 HYAL2Q12891 473 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 NLGN4XQ8N0W4 816 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 JSRP1Q96MG2 331 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 PMS2P2O95744 297 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 PRKAR1BP31321 381 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 CD70P32970 193 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 CXCL12P48061 93 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 CCR6P51684 374 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 PRRT3Q5FWE3 981 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 FCRLBQ6BAA4 426 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 TMEM225Q6GV28 225 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 FIP1L1Q6UN15 594 aaKnown RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 INTS14Q96SY0 518 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 CASRP41180 1078 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 RNF111Q6ZNA4 994 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 LINC01465Q8N7H1 131 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 TCEAL2Q9H3H9 227 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF705GA8MUZ8 300 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 SYT5O00445 386 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 LATO43561 262 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 BPNT1O95861 308 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 OPRD1P41143 372 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 CCDC71Q8IV32 467 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 FAM26EQ8N5C1 309 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 ISG20Q96AZ6 181 aaKnown RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 SLIRPQ9GZT3 109 aaKnown RBP18.37■□□□□ 0.53
SHANK1-203ENST00000391813 MPIG6BO95866 241 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 ZBTB37Q5TC79 503 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 LINC00597Q9H2U6 94 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 ANKRD19PQ9H560 264 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 HHATLQ9HCP6 504 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 KIF25Q9UIL4 384 aa18.37■□□□□ 0.53
SHANK1-203ENST00000391813 MEIS3P1A6NDR6 274 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 DPM1O60762 260 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 APBB3O95704 486 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 SOWAHCQ53LP3 525 aaPredicted RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 H3F3CQ6NXT2 135 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 MEX3DQ86XN8 651 aaKnown RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 ADAMTS18Q8TE60 1221 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 MAP6Q96JE9 813 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 TSPAN10Q9H1Z9 355 aaPredicted RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 RNF167Q9H6Y7 350 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 B3GALNT1O75752 331 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 ARRB2P32121 409 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 RABIFP47224 123 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 MRPS21P82921 87 aaKnown RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 HNRNPA1L2Q32P51 320 aaKnown RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 LHX8Q68G74 356 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 ST7LQ8TDW4 575 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 RNF128Q8TEB7 428 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 SLC17A9Q9BYT1 436 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 SRRQ9GZT4 340 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 UFSP2Q9NUQ7 469 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 ACTBL2Q562R1 376 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 BEND4Q6ZU67 534 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 C19orf25Q9UFG5 118 aaPredicted RBP18.36■□□□□ 0.53
SHANK1-203ENST00000391813 PRSS21Q9Y6M0 314 aa18.36■□□□□ 0.53
SHANK1-203ENST00000391813 PIP5K1CO60331 668 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 CSF3P09919 207 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 C1QTNF12Q5T7M4 302 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 RTL6Q6ICC9 239 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 LCN10Q6JVE6 187 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 DEFB119Q8N690 84 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 CREB3L4Q8TEY5 395 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 GLYATL2Q8WU03 294 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 PITX2Q99697 317 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 C1QTNF3Q9BXJ4 246 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 USP36Q9P275 1121 aaKnown RBP18.35■□□□□ 0.53
SHANK1-203ENST00000391813 ADAM29Q9UKF5 820 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SLC6A14Q9UN76 642 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 TMX2-CTNND1H3BSU7 103 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 JMJD7P0C870 316 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SPI1P17947 270 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 CSNK1DP48730 415 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 EXOSC2Q13868 293 aaKnown RBP18.35■□□□□ 0.53
SHANK1-203ENST00000391813 SHHQ15465 462 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 KANSL1Q7Z3B3 1105 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 CCDC190Q86UF4 302 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 GIMAP5Q96F15 307 aa18.35■□□□□ 0.53
SHANK1-203ENST00000391813 RRNAD1Q96FB5 475 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms