RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ACBD7Q8N6N7 88 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 OR5T3Q8NGG3 340 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 RFKQ969G6 155 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ADAT1Q9BUB4 502 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NANSQ9NR45 359 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF346Q9UL40 294 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 CBLCQ9ULV8 474 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NUBP2Q9Y5Y2 271 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 CABIN1Q9Y6J0 2220 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TDRD6O60522 2096 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 A0A0A6YYD5 115 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 GRXCR1A8MXD5 290 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TO15178 435 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SMAD9O15198 467 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SURF4O15260 269 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 RPN2P04844 631 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 LAMP2P13473 410 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 DRD2P14416 443 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NDUFV2P19404 249 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 MAKP20794 623 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 RAB13P51153 203 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 RAB28P51157 221 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 DUSP5Q16690 384 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PABPC1L2AQ5JQF8 200 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 CORO6Q6QEF8 472 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF322Q6U7Q0 402 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZDHHC1Q8WTX9 485 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NSMAFQ92636 917 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PRSS16Q9NQE7 514 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 EXOSC1Q9Y3B2 195 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 EDDM13A0A1B0GTR0 161 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC9B1P1A6NJY1 282 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 CASC3O15234 703 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 YKT6O15498 198 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ARPC5O15511 151 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 VEGFDO43915 354 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ANKRD34CP0C6C1 535 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF806P0C7X5 589 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 OC90Q02509 493 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 IRF4Q15306 451 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 FAM78AQ5JUQ0 283 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF613Q6PF04 617 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 RAB42Q8N4Z0 105 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 OR4K13Q8NH42 304 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 OR1S1Q8NH92 325 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 PATE1Q8WXA2 126 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 DIO2Q92813 273 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 WNT2BQ93097 391 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 TSACCQ96A04 125 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC25A18Q9H1K4 315 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 PRDM7Q9NQW5 492 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ACSS1Q9NUB1 689 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 PURGQ9UJV8 347 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 GPR34Q9UPC5 381 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 LRRK1Q38SD2 2015 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 TMEM129A0AVI4 362 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 EMC8O43402 210 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 CHST10O43529 356 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 SDC3O75056 442 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 RLN2P04090 185 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 MAPK9P45984 424 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 DGCR2P98153 550 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 MC2RQ01718 297 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 FGL1Q08830 312 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC36A2Q495M3 483 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 OR5W2Q8NH69 310 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ACOT11Q8WXI4 607 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 INTS12Q96CB8 462 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 FUZQ9BT04 418 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 BTBD1Q9H0C5 482 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 CA10Q9NS85 328 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ACAD8Q9UKU7 415 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 ASB4Q9Y574 426 aa11.52□□□□□ -0.57
PRPF40B-202ENST00000380281 C17orf113A0A1B0GUU1 675 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 RNF13O43567 381 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CPMP14384 443 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CBR1P16152 277 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 FNTBP49356 437 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CRMP1Q14194 572 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 RBMS2Q15434 407 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 NDUFA9Q16795 377 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 NDUFAF6Q330K2 333 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 RPLP0P6Q8NHW5 317 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms