RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DCSTAMPQ9H295 470 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 YARS2Q9Y2Z4 477 aaKnown RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 TBX19O60806 448 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 BMP8BP34820 402 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 LIMS1P48059 325 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 EMDP50402 254 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 SMIM11AP58511 58 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF91Q05481 1191 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 TRAM2Q15035 370 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ARSKQ6UWY0 536 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 OR4C3Q8NH37 302 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF420Q8TAQ5 688 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 LRRC20Q8TCA0 184 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 PITX2Q99697 317 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 LIPT1Q9Y234 373 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 C17orf105B2RV13 164 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ALG1L2C9J202 215 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 M0R082 166 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 TERTO14746 1132 aaKnown RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 MYL12BO14950 172 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CBX7O95931 251 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 GALP22466 123 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CD1CP29017 333 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CD79BP40259 229 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 GCGRP47871 477 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 HMGA2P52926 109 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 SKP1P63208 163 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 GLO1Q04760 184 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 ZP2Q05996 745 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CARTPTQ16568 116 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 OTPQ5XKR4 325 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 WDR88Q6ZMY6 472 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 SLC35F3Q8IY50 421 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 GPR135Q8IZ08 494 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 SFXN5Q8TD22 340 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 FAM122AQ96E09 287 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CLUHP3Q96NS8 147 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 CCNB1IP1Q9NPC3 277 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 KCND3Q9UK17 655 aa9.97□□□□□ -0.81
NEDD9-201ENST00000379433 RP1L1Q8IWN7 2480 aaPredicted RBP9.97□□□□□ -0.81
NEDD9-201ENST00000379433 C2orf72A6NCS6 295 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 H3BSH0 61 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 CLPXO76031 633 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 SNAPINO95295 136 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 DHFRP00374 187 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 SMIM10L1P0DMW3 83 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 FOLR1P15328 257 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 HTR2AP28223 471 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 GPR3P46089 330 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 OR1Q1Q15612 314 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 YOD1Q5VVQ6 348 aaPredicted RBP9.96□□□□□ -0.81
NEDD9-201ENST00000379433 SLC27A4Q6P1M0 643 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 OR13C2Q8NGS9 318 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 HTRA1Q92743 480 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 SMIM10Q96HG1 83 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 UFSP2Q9NUQ7 469 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 NUP50Q9UKX7 468 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 MRPS33Q9Y291 106 aaKnown RBP9.96□□□□□ -0.81
NEDD9-201ENST00000379433 DMRT1Q9Y5R6 373 aa9.96□□□□□ -0.81
NEDD9-201ENST00000379433 PATE3B3GLJ2 98 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 REM1O75628 298 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 SCO1O75880 301 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 KCNK2O95069 426 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 IGKV1D-16P01601 117 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 TGM1P22735 817 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 TSFMP43897 325 aaKnown RBP9.96□□□□□ -0.82
NEDD9-201ENST00000379433 SLC25A45Q8N413 288 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 CDRT4Q8N9R6 151 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 OR51G2Q8NGK0 314 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 C16orf52Q8NHV5 167 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 ADAMTS18Q8TE60 1221 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 IFT27Q9BW83 186 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 ACTR6Q9GZN1 396 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 PIGUQ9H490 435 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 NECTIN3Q9NQS3 549 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 CALML5Q9NZT1 146 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 FLRT3Q9NZU0 649 aa9.96□□□□□ -0.82
NEDD9-201ENST00000379433 FAM171A2A8MVW0 826 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 RAB38P57729 211 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 PSG6Q00889 435 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 NSDHLQ15738 373 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 NDUFA9Q16795 377 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 PCGF3Q3KNV8 242 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF791Q3KP31 576 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 RNF44Q7L0R7 432 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 RANBP3LQ86VV4 465 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 CELF2-AS1Q8N7Q2 184 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 MORN4Q8NDC4 146 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 OR9Q1Q8NGQ5 310 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 MCFD2Q8NI22 146 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 MOAP1Q96BY2 351 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 ADOQ96SZ5 270 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 BCL2L10Q9HD36 194 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 H2AFY2Q9P0M6 372 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SPIN1Q9Y657 262 aaPredicted RBP9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SERTM2A0A1B0GWG4 89 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1W2PR77 199 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 AGAP5A6NIR3 686 aa9.95□□□□□ -0.82
NEDD9-201ENST00000379433 SOCS6O14544 535 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms