RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 COL4A3Q01955 1670 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 NPEPPSL1A6NEC2 478 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 XPNPEP2O43895 674 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 PPBPP02775 128 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
UBR4-201ENST00000375218 MAGEA3P43357 314 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 SP4Q02446 784 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 TYW3Q6IPR3 259 aaKnown RBP8.29□□□□□ -1.08
UBR4-201ENST00000375218 TEX26Q8N6G2 289 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 FAM131CQ96AQ9 280 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 TMEM56Q96MV1 263 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 HBEGFQ99075 208 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 NEUROG2Q9H2A3 272 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 LHCGRP22888 699 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 SLC6A9P48067 706 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 GAGE1Q13065 139 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 PLA2G7Q13093 441 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 TXNRD3NBQ6F5E7 133 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 UGT3A1Q6NUS8 523 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 B3GLCTQ6Y288 498 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 SLC26A11Q86WA9 606 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 STHQ8IWL8 128 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 OR14K1Q8NGZ2 314 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 PSMG2Q969U7 264 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 OR2A14Q96R47 310 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 DCLRE1CQ96SD1 692 aaKnown RBP8.29□□□□□ -1.08
UBR4-201ENST00000375218 FICDQ9BVA6 458 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 RHCGQ9UBD6 479 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 KLQ9UEF7 1012 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 CD84Q9UIB8 345 aa8.29□□□□□ -1.08
UBR4-201ENST00000375218 KPNA4O00629 521 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 MAGEB4O15481 346 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 IGF2P01344 180 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 GAPDHP04406 335 aaKnown RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 SCG5P05408 212 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 MBL2P11226 248 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 HTR6P50406 440 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SLC25A3Q00325 362 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 NKAPLQ5M9Q1 402 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 NKAIN2Q5VXU1 208 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SLX4IPQ5VYV7 408 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SLC16A14Q7RTX9 510 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 OR6V1Q8N148 313 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SMIM12Q96EX1 92 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 MRPS26Q9BYN8 205 aaKnown RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 B3GAT2Q9NPZ5 323 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 C1orf109Q9NX04 203 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 GPR160Q9UJ42 338 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SLCO1B1Q9Y6L6 691 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 TSTD3H0UI37 97 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 M0QYG6 137 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 UNGP13051 313 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 EPHA3P29320 983 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 BCL6P41182 706 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 PSG3Q16557 428 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 HAGHQ16775 308 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 LEMD1Q68G75 181 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 PLET1Q6UQ28 207 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 QSOX2Q6ZRP7 698 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 NUDCD2Q8WVJ2 157 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 TNFAIP8L1Q8WVP5 186 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 EMG1Q92979 244 aaKnown RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 MUS81Q96NY9 551 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 RNF39Q9H2S5 420 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 HRASLSQ9HDD0 168 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SPHK1Q9NYA1 384 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 LOC102724200A0A096LPH7 203 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 MBLAC1A4D2B0 266 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 EEF2KO00418 725 aaKnown RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 OR1F1O43749 312 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SPAG7O75391 227 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 ACSM4P0C7M7 580 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 HGFP14210 728 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 PRKXP51817 358 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 CDR2Q01850 454 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 SELENBP1Q13228 472 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 GK2Q14410 553 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 P2RY11Q96G91 374 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 CCDC140Q96MF4 163 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 ALG8Q9BVK2 526 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 NPLQ9BXD5 320 aaPredicted RBP8.28□□□□□ -1.08
UBR4-201ENST00000375218 ASPNQ9BXN1 380 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 ACTRT3Q9BYD9 372 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 OR10A5Q9H207 317 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
UBR4-201ENST00000375218 I3L4J1 428 aa8.27□□□□□ -1.08
UBR4-201ENST00000375218 SRPX2O60687 465 aaPredicted RBP8.27□□□□□ -1.08
UBR4-201ENST00000375218 SLC35E2BP0CK96 405 aa8.27□□□□□ -1.08
UBR4-201ENST00000375218 STOMP27105 288 aa8.27□□□□□ -1.08
UBR4-201ENST00000375218 ASPAP45381 313 aa8.27□□□□□ -1.08
UBR4-201ENST00000375218 MAXP61244 160 aa8.27□□□□□ -1.08
UBR4-201ENST00000375218 SRSF1Q07955 248 aaKnown RBP eCLIP8.27□□□□□ -1.081e-7■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms