RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ASB15Q8WXK1 588 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 OMA1Q96E52 524 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 FRMD6Q96NE9 622 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 QRSL1Q9H0R6 528 aaKnown RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ANKRA2Q9H9E1 313 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 DNAJC27Q9NZQ0 273 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 PTGFRNQ9P2B2 879 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CCDC182A6NF36 153 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 H0YIG0 161 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 EFSO43281 561 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 ADRA2AP08913 450 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 CPMP14384 443 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 SMSP52788 366 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 ST3GAL3Q11203 375 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 BAMBIQ13145 260 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 GINS1Q14691 196 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 OVCH1Q7RTY7 1134 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 VRK2Q86Y07 508 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 SPACA3Q8IXA5 215 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 SNIP1Q8TAD8 396 aaKnown RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 MVB12AQ96EY5 273 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 ZC3HAV1LQ96H79 300 aaKnown RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 RNF121Q9H920 327 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 TAS2R16Q9NYV7 291 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 TVP23BQ9NYZ1 205 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
HMGA1-203ENST00000374116 PTRH2Q9Y3E5 179 aaKnown RBP13.12□□□□□ -0.31
HMGA1-203ENST00000374116 ACACBO00763 2458 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 A0A087WUU8 490 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 LOC100506127A0A0U1RQW1 187 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 C9J4A7 227 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TERTO14746 1132 aaKnown RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 KLF7O75840 302 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZIC2O95409 532 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 IFI6P09912 130 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 BTG2P78543 158 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZNF91Q05481 1191 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZNF79Q15937 498 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ARHGAP11BQ3KRB8 267 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZNF628Q5EBL2 1059 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 DNAJA4Q8WW22 397 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 DIO2Q92813 273 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ZG16BQ96DA0 208 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TSSK6Q9BXA6 273 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 POLHQ9Y253 713 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 CHST2Q9Y4C5 530 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ANKRD11Q6UB99 2663 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 A0A0B4J293 547 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 OR6C70A6NIJ9 312 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 MASP2O00187 686 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TLX2O43763 284 aaPredicted RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 KIAA0513O60268 411 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 PDGFAP04085 211 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ATP1B1P05026 303 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 SCG5P05408 212 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 UQCRC1P31930 480 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 EFNB1P98172 346 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TSPAN31Q12999 210 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 IL10RAQ13651 578 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TSTQ16762 297 aaKnown RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 FRRS1Q6ZNA5 592 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 UTS2BQ765I0 119 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 ATCAYQ86WG3 371 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 YIPF7Q8N8F6 280 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 SLC16A11Q8NCK7 471 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 CDS1Q92903 461 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 SPSB2Q99619 263 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 GPA33Q99795 319 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 CHCHD6Q9BRQ6 235 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TAPBPLQ9BX59 468 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 CTPS2Q9NRF8 586 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
HMGA1-203ENST00000374116 IL20Q9NYY1 176 aa13.11□□□□□ -0.31
HMGA1-203ENST00000374116 TCFL5Q9UL49 500 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms