RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CAMLGP49069 296 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 NDUFA6P56556 154 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 HTD2P86397 168 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 FAM69AQ5T7M9 428 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 CNTN4Q8IWV2 1026 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF436Q9C0F3 470 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 CAMK2AQ9UQM7 478 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 LINC01565O15544 149 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 DRD5P21918 477 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 PTH2RP49190 550 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 HSD11B2P80365 405 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 CLEC9AQ6UXN8 241 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR52E2Q8NGJ4 325 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 NTMT1Q9BV86 223 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR51J1Q9H342 316 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 IGLV3-10A0A075B6K4 115 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 ANKRD33BA6NCL7 494 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 AMY2AP04746 511 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 HACD4Q5VWC8 232 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 SERPINA11Q86U17 422 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 IQCF1Q8N6M8 205 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 DMRTA2Q96SC8 542 aa12.45□□□□□ -0.42
RAPGEF1-201ENST00000372189 H0Y8G0 127 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 RNASET2O00584 256 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 CAPNS1P04632 268 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 MRPL58Q14197 206 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 GTDC1Q4AE62 458 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ELP2Q6IA86 826 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR13H1Q8NG92 308 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 RBM14Q96PK6 669 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 GPR52Q9Y2T5 361 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ARNTLO00327 626 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 CRHBPP24387 322 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 AHRP35869 848 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 TLE4Q04727 773 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 LINC01599Q8WXQ3 324 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ADGRG7Q96K78 797 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 MRI1Q9BV20 369 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 GON7Q9BXV9 100 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF175Q9Y473 711 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 PIP5K1CO60331 668 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 NKAIN2Q5VXU1 208 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 NAGSQ8N159 534 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 B3GNT7Q8NFL0 401 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR52R1Q8NGF1 315 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZCCHC14Q8WYQ9 949 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 EXTL1Q92935 676 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 KCNIP2Q9NS61 270 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 MROH6A6NGR9 719 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ARPC5O15511 151 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SOX3P41225 446 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 CYCSP99999 105 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 PRDX1Q06830 199 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 NINJ1Q92982 152 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 NT5C3BQ969T7 300 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SLC25A44Q96H78 314 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 EMCNQ9ULC0 261 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZNF43P17038 809 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 GRPRP30550 384 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZXDBP98169 803 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 SPCS2Q15005 226 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR9A4Q8NGU2 314 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 PGAM5Q96HS1 289 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 GLTPQ9NZD2 209 aa12.44□□□□□ -0.42
RAPGEF1-201ENST00000372189 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 RRP8O43159 456 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ZFAND5O76080 213 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 ICAM2P13598 275 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 TNFRSF1BP20333 461 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 GDF1P27539 372 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PKLRP30613 574 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 RSU1Q15404 277 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 BCL2A1Q16548 175 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PARP16Q8N5Y8 322 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 OR5AK2Q8NH90 309 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 WFDC5Q8TCV5 224 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 PDLIM5Q96HC4 596 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 VRK1Q99986 396 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 H0YGG7 62 aa12.43□□□□□ -0.42
RAPGEF1-201ENST00000372189 CRHP06850 196 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms